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SCNpilot_cont_1000_p_scaffold_259

Search features with annotation key words

Displaying items 1-30 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_259_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1641..2099
DNA (459bp) protein (153aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL36390.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_p_scaffold_259_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2147..2995
DNA (849bp) protein (283aa)
hypothetical protein, partial n=1 Tax=Microbacterium yannicii RepID=UPI00036990F9
Uncharacterized protein {ECO:0000313|EMBL:KJL36391.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_259_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2992..4032
DNA (1041bp) protein (347aa)
Putative hydrolase YutF {ECO:0000313|EMBL:KJL36392.1}; EC=3.-.-.- {ECO:0000313|EMBL:KJL36392.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Sugar phosphatase of the HAD superfamily n=1 Tax=Microbacterium sp. TS-1 RepID=U2XCS9_9MICO rbh
sugar phosphatase of the HAD superfamily
SCNpilot_cont_1000_p_scaffold_259_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4078..4263
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL36393.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_p_scaffold_259_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4263..5063
DNA (801bp) protein (267aa)
16S/23S rRNA (Cytidine-2'-O)-methyltransferase TlyA {ECO:0000313|EMBL:KJL36394.1}; EC=2.1.1.226 {ECO:0000313|EMBL:KJL36394.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rRNA methylase; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K9U0_9MICO rbh
SCNpilot_cont_1000_p_scaffold_259_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5060..6028
DNA (969bp) protein (323aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ppnK; sugar kinase; K00858 NAD+ kinase [EC:2.7.1.23]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FC3B8
SCNpilot_cont_1000_p_scaffold_259_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6025..7722
DNA (1698bp) protein (566aa)
DNA repair protein RecN n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003701FC9
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
recN; ATPase; K03631 DNA repair protein RecN (Recombination protein N)
SCNpilot_cont_1000_p_scaffold_259_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7737..9437
DNA (1701bp) protein (567aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00089783}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00089804};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
pyrG; CTP synthase; K01937 CTP synthase [EC:6.3.4.2] rbh
CTP synthase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEQ8_MICTS rbh
SCNpilot_cont_1000_p_scaffold_259_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9421..10008
DNA (588bp) protein (196aa)
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KJL36398.1}; EC=3.6.1.13 {ECO:0000313|EMBL:KJL36398.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
NTP pyrophosphohydrolase including oxidative damage repair enzyme; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000365DAAF
SCNpilot_cont_1000_p_scaffold_259_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10025..10948
DNA (924bp) protein (308aa)
tyrosine recombinase XerD n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DBC24 rbh
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
xerD; site-specific recombinase XerD; K04763 integrase/recombinase XerD rbh
SCNpilot_cont_1000_p_scaffold_259_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11009..11899
DNA (891bp) protein (297aa)
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:KJL36400.1}; EC=3.6.-.- {ECO:0000313|EMBL:KJL36400.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Chromosome partitioning ATPase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KRX7_9MICO rbh
parA; ATPase; K03496 chromosome partitioning protein rbh
SCNpilot_cont_1000_p_scaffold_259_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11883..12815
DNA (933bp) protein (311aa)
chromosome segregation protein ScpA n=1 Tax=Microbacterium paraoxydans RepID=UPI0003733DDC rbh
Segregation and condensation protein A {ECO:0000313|EMBL:KJL36401.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein; K05896 segregation and condensation protein A rbh
SCNpilot_cont_1000_p_scaffold_259_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12805..13446
DNA (642bp) protein (214aa)
Segregation and condensation protein B n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9U8_9MICO
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transcriptional regulator containing the HTH domain; K06024 segregation and condensation protein B
SCNpilot_cont_1000_p_scaffold_259_14
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13443..14246
DNA (804bp) protein (268aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rsuA; 16S rRNA uridine-516 pseudouridylate synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] rbh
RNA pseudouridine synthase n=1 Tax=Microbacterium paraoxydans RepID=UPI000381B6B8 rbh
SCNpilot_cont_1000_p_scaffold_259_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14243..15367
DNA (1125bp) protein (375aa)
tyrA; prephenate dehydrogenase; K04517 prephenate dehydrogenase [EC:1.3.1.12] rbh
prephenate dehydrogenase n=1 Tax=Microbacterium sp. 11MF RepID=UPI000379D6F3 rbh
Prephenate dehydrogenase {ECO:0000313|EMBL:KJL36404.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_p_scaffold_259_16
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15364..16080
DNA (717bp) protein (239aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
cmk; cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14]
cytidylate kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D60FC
SCNpilot_cont_1000_p_scaffold_259_17
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16070..17593
DNA (1524bp) protein (508aa)
GTP-binding protein Der n=1 Tax=Microbacterium yannicii RepID=UPI00030536EF rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
engA; GTPase; K03977 GTP-binding protein rbh
SCNpilot_cont_1000_p_scaffold_259_18
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17635..18549
DNA (915bp) protein (305aa)
NTP pyrophosphohydrolase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B4FC68 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL36407.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
NTP pyrophosphohydrolase including oxidative damage repair enzyme
SCNpilot_cont_1000_p_scaffold_259_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18551..18931)
DNA (381bp) protein (127aa)
RNA-binding protein S4 n=1 Tax=Microbacterium yannicii RepID=UPI0002E862F8
Heat shock protein 15 {ECO:0000313|EMBL:KJL36408.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ribosome-associated heat shock protein implicated in the recycling of the 50S subunit; K04762 ribosome-associated heat shock protein Hsp15
SCNpilot_cont_1000_p_scaffold_259_20
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18928..19617)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000378CA05
YhhN-like protein {ECO:0000313|EMBL:KJL36409.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
yhhN-like family protein
SCNpilot_cont_1000_p_scaffold_259_21
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19688..20281)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LAW2_9MICO
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:KJL36410.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_259_22
Arthrobacter arilaitensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20672..20980
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Gordonia alkanivorans NBRC 16433 RepID=F9VRR7_9ACTO
hypothetical protein
Transposase of ISAar24, IS3 family, IS3 group, orfA {ECO:0000313|EMBL:CBT77222.1}; TaxID=861360 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 /; Re117).;"
SCNpilot_cont_1000_p_scaffold_259_23
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21154..21825
DNA (672bp) protein (224aa)
Putative transposase n=1 Tax=Rhodococcus qingshengii BKS 20-40 RepID=M2X6Y8_9NOCA
Putative transposase {ECO:0000313|EMBL:EME19359.1}; TaxID=1278077 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii BKS 20-40.;"
putative transposase
SCNpilot_cont_1000_p_scaffold_259_24
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22325..25105)
DNA (2781bp) protein (927aa)
Glycosyl hydrolase, glucoamylase n=1 Tax=Thermoanaerobacter siderophilus SR4 RepID=I9KSI4_9THEO
Glycosyl hydrolase, glucoamylase {ECO:0000313|EMBL:EIV99888.1}; Flags: Precursor;; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter siderophilus SR4.;"
carbohydrate-binding family 6 protein rbh
SCNpilot_cont_1000_p_scaffold_259_25
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25326..26531
DNA (1206bp) protein (402aa)
ROK family protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7FH35_9ACTO rbh
ROK family protein {ECO:0000313|EMBL:ELP70499.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
ROK family protein
SCNpilot_cont_1000_p_scaffold_259_26
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26637..27911
DNA (1275bp) protein (425aa)
ABC transporter, solute-binding protein id=7720339 bin=CNBR_ACT species=Actinomyces odontolyticus genus=Actinomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72935.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_1000_p_scaffold_259_27
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27951..28916
DNA (966bp) protein (322aa)
ABC transporter, permease protein id=7720338 bin=CNBR_ACT species=Actinomyces odontolyticus genus=Actinomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72936.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein
SCNpilot_cont_1000_p_scaffold_259_28
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28913..29755
DNA (843bp) protein (281aa)
ABC transporter, permease protein id=7720337 bin=CNBR_ACT species=Actinomyces odontolyticus genus=Actinomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72937.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein
SCNpilot_cont_1000_p_scaffold_259_29
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29752..31350
DNA (1599bp) protein (533aa)
Uncharacterized protein id=7720336 bin=CNBR_ACT species=Actinomyces odontolyticus genus=Actinomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:CCI53221.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_259_30
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

31362..33965
DNA (2604bp) protein (868aa)
Glycosyl hydrolase, glucoamylase n=1 Tax=Thermoanaerobacter siderophilus SR4 RepID=I9KSI4_9THEO rbh
Glycosyl hydrolase, glucoamylase {ECO:0000313|EMBL:EIV99888.1}; Flags: Precursor;; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter siderophilus SR4.;"
carbohydrate-binding family 6 protein rbh
Displaying items 1-30 of 153 in total

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