ggKbase home page

SCNpilot_cont_1000_p_scaffold_284

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_284_1
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..373
DNA (372bp) protein (124aa)
Uncharacterized protein potentially n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NC90_MICTS
hypothetical protein
Uncharacterized protein potentially {ECO:0000313|EMBL:BAJ73538.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_p_scaffold_284_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

581..847
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NC89_MICTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ73537.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_p_scaffold_284_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

844..1968
DNA (1125bp) protein (375aa)
Predicted glycosyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NC88_MICTS rbh
glycosyltransferase rbh
Predicted glycosyltransferase {ECO:0000313|EMBL:BAJ73536.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_p_scaffold_284_4
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1976..3208
DNA (1233bp) protein (411aa)
Predicted acyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NC87_MICTS rbh
acyltransferase rbh
Predicted acyltransferase {ECO:0000313|EMBL:BAJ73535.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_p_scaffold_284_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3205..4086
DNA (882bp) protein (294aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NC86_MICTS rbh
nucleoside-diphosphate-sugar epimerase rbh
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:BAJ73534.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_p_scaffold_284_6
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4086..4658
DNA (573bp) protein (191aa)
dTDP-4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose reductase n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HBI9_ARTCA
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ACL40377.1}; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
SCNpilot_cont_1000_p_scaffold_284_7
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4672..6048)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X294_OXAFO
Uncharacterized protein {ECO:0000313|EMBL:EEO27330.2}; TaxID=556268 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formigenes HOxBLS.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_284_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6132..7001)
DNA (870bp) protein (290aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
glucose-1-phosphate thymidylyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] rbh
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEP3_9MICO rbh
SCNpilot_cont_1000_p_scaffold_284_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7071..8069
DNA (999bp) protein (333aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rfbB; dTDP-D-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1J3_9MICO rbh
SCNpilot_cont_1000_p_scaffold_284_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8115..9350)
DNA (1236bp) protein (412aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBS3_MICTS rbh
polysaccharide/polyol phosphate ABC transporter ATPase; K09691 lipopolysaccharide transport system ATP-binding protein rbh
ABC-type polysaccharide/polyol phosphate transport system, ATPase component {ECO:0000313|EMBL:BAJ73533.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_p_scaffold_284_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9356..10267)
DNA (912bp) protein (304aa)
ABC-type polysaccharide/polyol phosphate export systems, permease component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBS2_MICTS rbh
polysaccharide/polyol phosphate ABC transporter permease; K09690 lipopolysaccharide transport system permease protein rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_p_scaffold_284_12
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10343..11272)
DNA (930bp) protein (310aa)
UPI0003C7EF53 related cluster n=1 Tax=unknown RepID=UPI0003C7EF53
PE-PGRS family protein {ECO:0000313|EMBL:EGD45413.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
NAD-dependent epimerase/dehydratase family protein
SCNpilot_cont_1000_p_scaffold_284_13
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11269..12270)
DNA (1002bp) protein (334aa)
glycosyltransferase (EC:2.4.-.-) rbh
mannosyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI000349D3F8 rbh
Putative glycosyl transferase {ECO:0000313|EMBL:CEI46108.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
SCNpilot_cont_1000_p_scaffold_284_14
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12267..13103)
DNA (837bp) protein (279aa)
UPI0003C7F271 related cluster n=1 Tax=unknown RepID=UPI0003C7F271
glycosyl transferase
Putative glycosyl transferase {ECO:0000313|EMBL:CAQ00753.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
SCNpilot_cont_1000_p_scaffold_284_15
Mycobacterium liflandii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13100..13558)
DNA (459bp) protein (153aa)
UPI0003C7DDE1 related cluster n=1 Tax=unknown RepID=UPI0003C7DDE1
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGC62992.1}; TaxID=459424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium liflandii (strain 128FXT).;"
SCNpilot_cont_1000_p_scaffold_284_16
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13602..15821)
DNA (2220bp) protein (740aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003670329 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERI44158.1}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
wcqG; hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_284_17
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15924..17075
DNA (1152bp) protein (384aa)
glf; UDP-galactopyranose mutase; K01854 UDP-galactopyranose mutase [EC:5.4.99.9] rbh
UDP-galactopyranose mutase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1K4_9MICO rbh
UDP-galactopyranose mutase {ECO:0000313|EMBL:EIC09024.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_cont_1000_p_scaffold_284_18
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17092..19008)
DNA (1917bp) protein (639aa)
Predicted glycosyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBQ4_MICTS
glycosyltransferase
Predicted glycosyltransferase {ECO:0000313|EMBL:BAJ73514.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_p_scaffold_284_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19192..21267
DNA (2076bp) protein (692aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E20DA6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL35608.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_284_20
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21271..22257)
DNA (987bp) protein (329aa)
Galactofuranosyl transferase GlfT1 {ECO:0000313|EMBL:KJL35610.1}; EC=2.4.1.287 {ECO:0000313|EMBL:KJL35610.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEN2_9MICO rbh
glycosyltransferase rbh
SCNpilot_cont_1000_p_scaffold_284_21
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22263..23555)
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DB0C0E rbh
O-Antigen ligase {ECO:0000313|EMBL:KJL35611.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
lipid A core - O-antigen ligase rbh
SCNpilot_cont_1000_p_scaffold_284_22
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23552..24745)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AIW1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL35612.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
lipid A core - O-antigen ligase
SCNpilot_cont_1000_p_scaffold_284_23
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24785..25951
DNA (1167bp) protein (389aa)
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:KJL35613.1}; EC=5.3.1.8 {ECO:0000313|EMBL:KJL35613.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
phosphomannose isomerase; K01809 mannose-6-phosphate isomerase [EC:5.3.1.8]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003815987
SCNpilot_cont_1000_p_scaffold_284_24
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26085..26405
DNA (321bp) protein (107aa)
transcription factor WhiB n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003656B12
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
WhiB family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_284_25
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26478..29345
DNA (2868bp) protein (956aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00037AB087 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL35615.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
glycosyltransferase rbh
SCNpilot_cont_1000_p_scaffold_284_26
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29342..30748
DNA (1407bp) protein (469aa)
Large extracellular alpha-helical protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBP8_MICTS
Uncharacterized protein {ECO:0000313|EMBL:KJL35616.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
large extracellular alpha-helical protein
SCNpilot_cont_1000_p_scaffold_284_27
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30755..31000)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YYQ2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL35617.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_284_28
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31316..32164
DNA (849bp) protein (283aa)
Cutinase n=1 Tax=Colletotrichum gloeosporioides (strain Cg-14) RepID=T0KSB7_COLGC
Cutinase {ECO:0000313|EMBL:KJL35618.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_p_scaffold_284_29
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32121..32507
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL35619.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_p_scaffold_284_30
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32558..32764
DNA (207bp) protein (69aa)
alcohol dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B2EC98
Uncharacterized protein {ECO:0000313|EMBL:KJL35620.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
Displaying items 1-30 of 90 in total

View Taxonomy