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SCNpilot_cont_1000_p_scaffold_610

Search features with annotation key words

Displaying items 1-30 of 182 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_610_1
unknown

Not on your lists

comp(2..88)
DNA (87bp) protein (29aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_610_2
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(91..1503)
DNA (1413bp) protein (471aa)
Carbohydrate kinase FGGY n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XH34_NAKMY
Uncharacterized protein {ECO:0000313|EMBL:KHK97744.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
carbohydrate kinase FGGY
SCNpilot_cont_1000_p_scaffold_610_3
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1500..2546)
DNA (1047bp) protein (349aa)
Phosphomannose isomerase n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0IT95_MYCSM rbh
Leucobacter komagatae strain VKM ST2845 L_komagatae_08, whole genome shotgun sequence {ECO:0000313|EMBL:KIP52696.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
phosphomannose isomerase rbh
SCNpilot_cont_1000_p_scaffold_610_4
Rhodococcus sp. B7740, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2543..3640)
DNA (1098bp) protein (366aa)
Transcriptional regulator, LacI family n=1 Tax=Blastococcus saxobsidens (strain DD2) PF8_BLASD">RepID=H6RPF8_BLASD
LacI-family protein transcriptional regulator {ECO:0000313|EMBL:AJW38146.1}; TaxID=1564114 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. B7740.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_610_5
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3768..4787)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287E578
Uncharacterized protein {ECO:0000313|EMBL:EYT54561.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_610_6
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4960..5799
DNA (840bp) protein (280aa)
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] rbh
aldolase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028963A1 rbh
Aldolase {ECO:0000313|EMBL:KEP74681.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SCNpilot_cont_1000_p_scaffold_610_7
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5796..6950
DNA (1155bp) protein (385aa)
Oxidoreductase domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XH29_NAKMY rbh
Oxidoreductase {ECO:0000313|EMBL:KEP74680.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
oxidoreductase domain-containing protein rbh
SCNpilot_cont_1000_p_scaffold_610_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7050..8057
DNA (1008bp) protein (336aa)
LacI family transcriptional regulator n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287F63E rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CCH21074.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_610_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8073..9026)
DNA (954bp) protein (318aa)
LacI family transcription regulator n=1 Tax=Agromyces subbeticus RepID=UPI0003B54DCF rbh
Ribose operon repressor {ECO:0000313|EMBL:KJL39314.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
SCNpilot_cont_1000_p_scaffold_610_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9040..10530
DNA (1491bp) protein (497aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
sugar ABC transporter ATPase; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] rbh
D-ribose transporter ATP binding protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K0K8_9MICO rbh
SCNpilot_cont_1000_p_scaffold_610_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10527..11549
DNA (1023bp) protein (341aa)
ATPase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KA75_9MICO rbh
Autoinducer 2 import system permease protein LsrC {ECO:0000313|EMBL:KJL39312.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ribose/xylose/arabinose/galactoside ABC transporters, permease components; K10556 AI-2 transport system permease protein rbh
SCNpilot_cont_1000_p_scaffold_610_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11546..12598
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEY7_9MICO rbh
Autoinducer 2 import system permease protein LsrD {ECO:0000313|EMBL:KJL39311.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ribose/xylose/arabinose/galactoside ABC transporters, permease components rbh
SCNpilot_cont_1000_p_scaffold_610_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12658..13695
DNA (1038bp) protein (346aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCZ8_9MICO rbh
Autoinducer 2-binding protein LsrB {ECO:0000313|EMBL:KJL39310.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
sugar ABC transporter periplasmic protein rbh
SCNpilot_cont_1000_p_scaffold_610_14
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13760..14137
DNA (378bp) protein (126aa)
L-rhamnose mutarotase {ECO:0000313|EMBL:KJL39309.1}; EC=5.1.3.- {ECO:0000313|EMBL:KJL39309.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein; K03534 L-rhamnose mutarotase [EC:5.1.3.-]
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI0003751339
SCNpilot_cont_1000_p_scaffold_610_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14134..15300
DNA (1167bp) protein (389aa)
Xylose isomerase {ECO:0000313|EMBL:KJL39308.1}; EC=5.3.1.5 {ECO:0000313|EMBL:KJL39308.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rhamnose isomerase n=1 Tax=Microbacterium sp. B19 RepID=UPI000344BEAB rbh
sugar isomerase rbh
SCNpilot_cont_1000_p_scaffold_610_16
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15383..16132
DNA (750bp) protein (250aa)
DeoR-family transcriptional regulator n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AFA0_9ACTN
Lactose phosphotransferase system repressor {ECO:0000313|EMBL:KJL39307.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
DeoR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_610_17
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16186..18222
DNA (2037bp) protein (679aa)
4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 {ECO:0000313|EMBL:KJL39306.1}; EC=1.2.1.62 {ECO:0000313|EMBL:KJL39306.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
short-chain dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C868C rbh
rhaD; hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_610_18
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18219..19664
DNA (1446bp) protein (482aa)
Rhamnulokinase {ECO:0000313|EMBL:KJL39305.1}; EC=2.7.1.5 {ECO:0000313|EMBL:KJL39305.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
carbohydrate kinase; K00848 rhamnulokinase [EC:2.7.1.5]
Sugar kinase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XM23_9MICO rbh
SCNpilot_cont_1000_p_scaffold_610_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19673..20938
DNA (1266bp) protein (422aa)
(S)-mandelate dehydrogenase {ECO:0000313|EMBL:KJL39304.1}; EC=1.1.99.31 {ECO:0000313|EMBL:KJL39304.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
L-lactate dehydrogenase; K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] rbh
lactate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003794101 rbh
SCNpilot_cont_1000_p_scaffold_610_20
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20922..21767)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000381FEDA
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:KJL39303.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transglutaminase-like enzyme, cysteine protease
SCNpilot_cont_1000_p_scaffold_610_21
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21764..22699)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=termite gut metagenome RepID=S0DEK5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KJL39302.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_610_22
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22690..24456)
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=termite gut metagenome RepID=S0DFQ9_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL39301.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_610_23
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24606..26153
DNA (1548bp) protein (516aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000313|EMBL:KJL39300.1}; EC=1.8.-.- {ECO:0000313|EMBL:KJL39300.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Sulfite oxidase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8ND76_MICTS
sulfite oxidase
SCNpilot_cont_1000_p_scaffold_610_24
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26396..27172)
DNA (777bp) protein (259aa)
2,2-dialkylglycine decarboxylase {ECO:0000313|EMBL:KJL42756.1}; EC=4.1.1.64 {ECO:0000313|EMBL:KJL42756.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037919BD
hypothetical protein
SCNpilot_cont_1000_p_scaffold_610_25
unknown

Not on your lists

27300..29051
DNA (1752bp) protein (584aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_610_26
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29114..30334)
DNA (1221bp) protein (407aa)
Ornithine aminotransferase {ECO:0000313|EMBL:KJL42757.1}; EC=2.6.1.13 {ECO:0000313|EMBL:KJL42757.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rocD1; ornithine/acetylornithine aminotransferase; K00819 ornithine--oxo-acid transaminase [EC:2.6.1.13] rbh
ornithine-oxoacid aminotransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000382559C rbh
SCNpilot_cont_1000_p_scaffold_610_27
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30331..31188)
DNA (858bp) protein (286aa)
amidinotransferase n=1 Tax=Microbacterium yannicii RepID=UPI0002F95BB2
Amidinotransferase {ECO:0000313|EMBL:KJL42758.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
N-Dimethylarginine dimethylaminohydrolase
SCNpilot_cont_1000_p_scaffold_610_28
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31495..33648
DNA (2154bp) protein (718aa)
major facilitator transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B58D78 rbh
Multidrug resistance protein 3 {ECO:0000313|EMBL:KJL42759.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
permease of the major facilitator superfamily rbh
SCNpilot_cont_1000_p_scaffold_610_29
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33938..37582)
DNA (3645bp) protein (1215aa)
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:KJL42760.1}; EC=1.2.1.88 {ECO:0000313|EMBL:KJL42760.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Microbacterium yannicii RepID=UPI0002E57505 rbh
proline dehydrogenase
SCNpilot_cont_1000_p_scaffold_610_30
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37703..38635
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003740B77 rbh
HTH-type transcriptional regulator GltC {ECO:0000313|EMBL:KJL42761.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transcriptional regulator
Displaying items 1-30 of 182 in total

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