ggKbase home page

SCNpilot_cont_1000_p_scaffold_985

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_985_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..469)
DNA (468bp) protein (156aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009500}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00581}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
argG; argininosuccinate synthase; K01940 argininosuccinate synthase [EC:6.3.4.5]
argininosuccinate synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F2C6F
SCNpilot_cont_1000_p_scaffold_985_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(520..1224)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XN23_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL35995.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_985_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1333..2619
DNA (1287bp) protein (429aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
purA; adenylosuccinate synthase; K01939 adenylosuccinate synthase [EC:6.3.4.4]
Adenylosuccinate synthetase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9F4_9MICO rbh
SCNpilot_cont_1000_p_scaffold_985_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2628..3842
DNA (1215bp) protein (405aa)
6-phosphogluconolactonase {ECO:0000313|EMBL:KJL35997.1}; EC=3.1.1.31 {ECO:0000313|EMBL:KJL35997.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000373CB24
3-carboxymuconate cyclase
SCNpilot_cont_1000_p_scaffold_985_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3891..4529)
DNA (639bp) protein (213aa)
phospholipase/carboxylesterase (EC:3.1.-.-); K06999 phospholipase/carboxylesterase
Phospholipase/carboxylesterase family protein n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VST0_ARTAR
Putative hydrolase {ECO:0000313|EMBL:KJL35998.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_p_scaffold_985_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4594..5172)
DNA (579bp) protein (193aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A5M5_CELGA
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:KJL35999.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
NADP oxidoreductase coenzyme F420-dependent; K06988
SCNpilot_cont_1000_p_scaffold_985_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5279..5788
DNA (510bp) protein (170aa)
Regulatory protein MarR n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A5M6_CELGA
Transcriptional regulator SlyA {ECO:0000313|EMBL:KJL36000.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
regulatory protein MarR
SCNpilot_cont_1000_p_scaffold_985_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5831..6985)
DNA (1155bp) protein (385aa)
permease n=1 Tax=Humibacter albus RepID=UPI0003B4AAF8
Pheromone autoinducer 2 transporter {ECO:0000313|EMBL:KJL36001.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
permease
SCNpilot_cont_1000_p_scaffold_985_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7068..7367
DNA (300bp) protein (100aa)
chorismate mutase; K04092 chorismate mutase [EC:5.4.99.5]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003735CBC
T-protein {ECO:0000313|EMBL:KJL36002.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_p_scaffold_985_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7527..8897
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003767EA9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL36003.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
cell division initiation protein
SCNpilot_cont_1000_p_scaffold_985_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8917..9135)
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL36004.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_p_scaffold_985_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9186..10214)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037A3B6C
Uncharacterized protein {ECO:0000313|EMBL:KJL36005.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_985_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10218..10607)
DNA (390bp) protein (130aa)
membrane protein n=1 Tax=Agromyces italicus RepID=UPI0003B66343
Uncharacterized protein {ECO:0000313|EMBL:KJL36006.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_985_14
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10746..11504)
DNA (759bp) protein (253aa)
Mycothiol acetyltransferase {ECO:0000313|EMBL:KJL36007.1}; EC=2.3.1.189 {ECO:0000313|EMBL:KJL36007.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000364FE8C
acetyltransferase
SCNpilot_cont_1000_p_scaffold_985_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11569..12327)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031A5649 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL36008.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_985_16
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12365..12496)
DNA (132bp) protein (44aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL36009.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_p_scaffold_985_17
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12493..14838)
DNA (2346bp) protein (782aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Mic
purL; phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
phosphoribosylglycinamide synthetase n=1 Tax=Microbacterium yannicii RepID=UPI0003119CE4 rbh
SCNpilot_cont_1000_p_scaffold_985_18
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15002..15463
DNA (462bp) protein (154aa)
Putative intracellular protease/amidase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N7S9_MICTS
Uncharacterized protein {ECO:0000313|EMBL:KJL36011.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
intracellular protease/amidase
SCNpilot_cont_1000_p_scaffold_985_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15550..16086)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000375D718
Uncharacterized protein {ECO:0000313|EMBL:KJL36012.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_p_scaffold_985_20
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16897..17349
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL36014.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_p_scaffold_985_21
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17488..18072
DNA (585bp) protein (195aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL36015.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_p_scaffold_985_22
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18117..18464
DNA (348bp) protein (116aa)
ArsR family transcriptional regulator n=1 Tax=Microbacterium RepID=UPI00037A8F95
HTH-type transcriptional regulator {ECO:0000313|EMBL:KJL36016.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
putative ArsR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_985_23
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18518..19495
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000381C5F0
Uncharacterized protein {ECO:0000313|EMBL:KJL36017.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_985_24
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19520..20197)
DNA (678bp) protein (226aa)
Fis family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI000347DFA2 rbh
KDP operon transcriptional regulatory protein KdpE {ECO:0000313|EMBL:KJL36018.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K07667 two-component system, OmpR family, KDP operon response regulator KdpE rbh
SCNpilot_cont_1000_p_scaffold_985_25
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20194..22731)
DNA (2538bp) protein (846aa)
Sensor protein KdpD {ECO:0000313|EMBL:KJL36019.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL36019.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
osmosensitive K+ channel histidine kinase; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] rbh
Osmosensitive K+ channel histidine kinase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N7S7_MICTS rbh
SCNpilot_cont_1000_p_scaffold_985_26
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22757..23371)
DNA (615bp) protein (205aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
kdpC; putative potassium-transporting ATPase C chain,P-type ATPase (EC:3.6.3.12); K01548 K+-transporting ATPase ATPase C chain [EC:3.6.3.12]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003625F91
SCNpilot_cont_1000_p_scaffold_985_27
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23391..23837)
DNA (447bp) protein (149aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
kdpB; putative potassium-transporting ATPase B chain,P-type ATPase (EC:3.6.3.12); K01547 K+-transporting ATPase ATPase B chain [EC:3.6.3.12]
Potassium-transporting ATPase B chain n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8U5_9MICO
SCNpilot_cont_1000_p_scaffold_985_28
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23924..24715
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA07 RepID=V8E8M5_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EXU92327.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
SCNpilot_cont_1000_p_scaffold_985_29
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24743..25039
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA07 RepID=V8E8M5_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EXU92327.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
SCNpilot_cont_1000_p_scaffold_985_30
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25410..27092)
DNA (1683bp) protein (561aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
K+-transporting ATPase, A chain; K01546 K+-transporting ATPase ATPase A chain [EC:3.6.3.12]
ATPase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000374C8F2
Displaying items 1-30 of 87 in total

View Taxonomy