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SCNpilot_cont_1000_p_scaffold_1229

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1229_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(290..1558)
DNA (1269bp) protein (423aa)
Transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEJ7_MICTS
Biofilm regulatory protein A {ECO:0000313|EMBL:KJL37029.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1229_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1862..2686)
DNA (825bp) protein (275aa)
Sugar phosphatase YidA {ECO:0000313|EMBL:KJL37028.1}; EC=3.1.3.23 {ECO:0000313|EMBL:KJL37028.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
HAD-superfamily hydrolase, subfamily IIB n=2 Tax=Microbacterium RepID=H8E936_9MICO rbh
hydrolase of the HAD superfamily
SCNpilot_cont_1000_p_scaffold_1229_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2683..3963)
DNA (1281bp) protein (427aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11] rbh
seryl-tRNA synthetase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000366CD3B rbh
SCNpilot_cont_1000_p_scaffold_1229_4
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4012..5214)
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000345103D
Uncharacterized protein {ECO:0000313|EMBL:KGM10969.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1229_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5249..6244
DNA (996bp) protein (332aa)
Diacylglycerol kinase {ECO:0000313|EMBL:KJL37026.1}; EC=2.7.1.107 {ECO:0000313|EMBL:KJL37026.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
sphingosine kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B63524
sphingosine kinase and enzyme; K07029
SCNpilot_cont_1000_p_scaffold_1229_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6231..6671)
DNA (441bp) protein (147aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL37025.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_p_scaffold_1229_7
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6792..8468
DNA (1677bp) protein (559aa)
RNA polymerase subunit sigma-70 n=1 Tax=Agromyces italicus RepID=UPI0003B465E2
IgA FC receptor {ECO:0000313|EMBL:KJL24378.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hemagglutinin/hemolysin-like protein
SCNpilot_cont_1000_p_scaffold_1229_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8545..9882
DNA (1338bp) protein (446aa)
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:KJL39328.1}; EC=4.1.99.3 {ECO:0000313|EMBL:KJL39328.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
deoxyribodipyrimidine photolyase; K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
deoxyribodipyrimidine photo-lyase n=1 Tax=Microbacterium yannicii RepID=UPI0002EE79CB rbh
SCNpilot_cont_1000_p_scaffold_1229_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9902..10978
DNA (1077bp) protein (359aa)
Limonene 1,2-monooxygenase {ECO:0000313|EMBL:KJL39327.1}; EC=1.14.13.107 {ECO:0000313|EMBL:KJL39327.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
luciferase n=1 Tax=Microbacterium RepID=UPI000380CFA4 rbh
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase
SCNpilot_cont_1000_p_scaffold_1229_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11008..12333
DNA (1326bp) protein (442aa)
DeoR family transcriptional regulator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B61853
Alpha-ketoglutarate permease {ECO:0000313|EMBL:KJL39326.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
arabinose efflux permease family protein; K03761 MFS transporter, MHS family, alpha-ketoglutarate permease
SCNpilot_cont_1000_p_scaffold_1229_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12261..13226)
DNA (966bp) protein (322aa)
Prephenate dehydratase {ECO:0000313|EMBL:KJL39325.1}; EC=4.2.1.51 {ECO:0000313|EMBL:KJL39325.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
pheA; prephenate dehydratase; K04518 prephenate dehydratase [EC:4.2.1.51]
prephenate dehydratase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036DBB70 rbh
SCNpilot_cont_1000_p_scaffold_1229_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13279..14919
DNA (1641bp) protein (547aa)
Phosphoglucomutase {ECO:0000313|EMBL:KJL39324.1}; EC=5.4.2.2 {ECO:0000313|EMBL:KJL39324.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
pgm; phosphoglucomutase; K01835 phosphoglucomutase [EC:5.4.2.2] rbh
Phosphoglucomutase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NE20_MICTS rbh
SCNpilot_cont_1000_p_scaffold_1229_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14990..15976
DNA (987bp) protein (329aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KJL39323.1}; EC=5.1.3.2 {ECO:0000313|EMBL:KJL39323.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
galE1; hypothetical protein; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-glucose 4-epimerase n=1 Tax=Microbacterium paraoxydans RepID=UPI0003813091 rbh
SCNpilot_cont_1000_p_scaffold_1229_14
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15973..16752
DNA (780bp) protein (260aa)
Putative non-heme bromoperoxidase BpoC {ECO:0000313|EMBL:KJL39322.1}; EC=1.11.1.18 {ECO:0000313|EMBL:KJL39322.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Putative hydrolase n=1 Tax=Kocuria palustris PEL RepID=M2YHN0_9MICC
alpha/beta hydrolase fold superfamily protein
SCNpilot_cont_1000_p_scaffold_1229_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16809..17798)
DNA (990bp) protein (330aa)
F420-dependent oxidoreductase n=1 Tax=Glaciibacter superstes RepID=UPI0003B3E5B7
Pristinamycin IIA synthase subunit A {ECO:0000313|EMBL:KJL39321.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase
SCNpilot_cont_1000_p_scaffold_1229_16
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17825..18685)
DNA (861bp) protein (287aa)
DNA adenine methyltransferase YhdJ {ECO:0000313|EMBL:KJL39320.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KJL39320.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003614BEC rbh
DNA methyltransferase
SCNpilot_cont_1000_p_scaffold_1229_17
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18682..19731)
DNA (1050bp) protein (350aa)
Putative lipoate-protein ligase A {ECO:0000313|EMBL:KJL39319.1}; EC=2.7.7.63 {ECO:0000313|EMBL:KJL39319.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
lipoate-protein ligase A; K03800 lipoate-protein ligase A [EC:2.7.7.63] rbh
lipoate-protein ligase A n=1 Tax=Microbacterium sp. B19 RepID=UPI0003479F7A rbh
SCNpilot_cont_1000_p_scaffold_1229_18
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19827..20675)
DNA (849bp) protein (283aa)
Phospholipase YtpA {ECO:0000313|EMBL:KJL39318.1}; EC=3.1.1.- {ECO:0000313|EMBL:KJL39318.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
lysophospholipase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D2CC8 rbh
lysophospholipase rbh
SCNpilot_cont_1000_p_scaffold_1229_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20759..22345
DNA (1587bp) protein (529aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0U9_9MICO rbh
Antiseptic resistance protein {ECO:0000313|EMBL:KJL39317.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
permease of the major facilitator superfamily
SCNpilot_cont_1000_p_scaffold_1229_20
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22442..22888
DNA (447bp) protein (149aa)
Regulatory protein MarR n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E0V0_9MICO
Putative HTH-type transcriptional regulator YusO {ECO:0000313|EMBL:KJL39316.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1229_21
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22885..24264
DNA (1380bp) protein (460aa)
MFS transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI0003488E1F
Enterobactin exporter EntS {ECO:0000313|EMBL:KJL39315.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
permease of the major facilitator superfamily
SCNpilot_cont_1000_p_scaffold_1229_22
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24304..25032)
DNA (729bp) protein (243aa)
L-xylulose reductase n=1 Tax=Blastococcus saxobsidens (strain DD2) PF3_BLASD">RepID=H6RPF3_BLASD rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KEP74230.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
Dcxr; L-xylulose reductase rbh
SCNpilot_cont_1000_p_scaffold_1229_23
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25287..25988
DNA (702bp) protein (234aa)
Phosphoribulokinase/uridine kinase n=1 Tax=Blastococcus saxobsidens (strain DD2) PF4_BLASD">RepID=H6RPF4_BLASD
phosphoribulokinase/uridine kinase
Phosphoribulokinase/uridine kinase {ECO:0000313|EMBL:CCG04013.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_cont_1000_p_scaffold_1229_24
unknown

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25985..26083
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 24 items

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