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SCNpilot_cont_1000_p_scaffold_9086_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_9086_curated_1
unknown

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comp(64..744)
DNA (681bp) protein (227aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_9086_curated_2
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(815..1408)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JUX5_9PROT
Conserved protein {ECO:0000313|EMBL:GAK43828.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_9086_curated_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1501..2862)
DNA (1362bp) protein (454aa)
Anaerobic glycerol-3-phosphate dehydrogenase subunit C n=1 Tax=Oceanibaculum indicum P24 RepID=K2J5L2_9PROT
Anaerobic glycerol-3-phosphate dehydrogenase subunit C {ECO:0000313|EMBL:EKE78351.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
anaerobic glycerol-3-phosphate dehydrogenase subunit C
SCNpilot_cont_1000_p_scaffold_9086_curated_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2985..3407)
DNA (423bp) protein (141aa)
Rubrerythrin n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HZA3_PARL1
rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:ABS65236.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_9086_curated_5
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3603..4061)
DNA (459bp) protein (153aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z4Z8_9PROT
Iron-responsive regulator Irr {ECO:0000313|EMBL:KIL97996.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
Fe2+/Zn2+ uptake regulation protein; K09826 Fur family transcriptional regulator, iron response regulator
SCNpilot_cont_1000_p_scaffold_9086_curated_6
Alteromonas sp. ALT199, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4298..4846
DNA (549bp) protein (183aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; TaxID=1298865 species="Bacteria; Proteobacteria; Gammaproteobact
3-hydroxydecanoyl-(acyl carrier protein) dehydratase (EC:4.2.1.60); K01716 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.60]
3-hydroxydecanoyl-ACP dehydratase n=1 Tax=Oceanimonas smirnovii RepID=UPI0003772757
SCNpilot_cont_1000_p_scaffold_9086_curated_7
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4880..5578
DNA (699bp) protein (233aa)
beta-ketoacyl synthase; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
Beta-ketoacyl synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HZA0_PARL1
Beta-ketoacyl synthase {ECO:0000313|EMBL:ABS65233.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Displaying 7 items

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