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SCNpilot_cont_1000_p_scaffold_3987_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3987_curated_1
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..124)
DNA (123bp) protein (41aa)
YicC domain protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYR2_HYPDA
Protein YicC {ECO:0000313|EMBL:GAM99687.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
YicC domain-containing protein
SCNpilot_cont_1000_p_scaffold_3987_curated_2
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(179..1186)
DNA (1008bp) protein (336aa)
aminodeoxychorismate lyase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003685A27
aminodeoxychorismate lyase; K07082 UPF0755 protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCNpilot_cont_1000_p_scaffold_3987_curated_3
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1186..2442)
DNA (1257bp) protein (419aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
beta-ketoacyl synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=uncultured bacterium RepID=K2AXL1_9BACT
SCNpilot_cont_1000_p_scaffold_3987_curated_4
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2465..2704)
DNA (240bp) protein (80aa)
UPI0003CF0F7D related cluster n=1 Tax=unknown RepID=UPI0003CF0F7D
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
acyl carrier protein
SCNpilot_cont_1000_p_scaffold_3987_curated_5
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2856..3596)
DNA (741bp) protein (247aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Sagittula stellata E-37 RepID=A3JZ82_9RHOB
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EBA09785.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
SCNpilot_cont_1000_p_scaffold_3987_curated_6
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3596..4492)
DNA (897bp) protein (299aa)
fabD; malonyl CoA-acyl carrier protein transacylase (MCT); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5D8_AZOL4
SCNpilot_cont_1000_p_scaffold_3987_curated_7
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4594..5901)
DNA (1308bp) protein (436aa)
Permeases of the major facilitator superfamily n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ID36_AZOC5
major facilitator superfamily permease; K13021 MFS transporter, ACS family, tartrate transporter
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:BAF88876.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_1000_p_scaffold_3987_curated_8
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5901..7157)
DNA (1257bp) protein (419aa)
Permeases of the major facilitator superfamily n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ID36_AZOC5
major facilitator superfamily permease; K13021 MFS transporter, ACS family, tartrate transporter
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:BAF88876.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_1000_p_scaffold_3987_curated_9
unknown

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comp(7215..9575)
DNA (2361bp) protein (787aa)
Putative enzyme {ECO:0000313|EMBL:CPR20388.1}; EC=3.6.3.- {ECO:0000313|EMBL:CPR20388.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
plasma-membrane proton-efflux P-type ATPase (EC:3.6.3.6); K01535 H+-transporting ATPase [EC:3.6.3.6]
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003796A3F
SCNpilot_cont_1000_p_scaffold_3987_curated_10
unknown

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9786..9938
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 10 items

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