ggKbase home page

SCNpilot_cont_1000_p_scaffold_5459_curated

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5459_curated_1
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..848)
DNA (846bp) protein (282aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037E2AF1
SCNpilot_cont_1000_p_scaffold_5459_curated_2

Not on your lists

859..1713
DNA (855bp) protein (285aa)
phosphoserine phosphatase (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3]
Phosphoserine phosphatase SerB n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VFU1_CAUST
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:AIA16259.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_5459_curated_3
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1764..3194)
DNA (1431bp) protein (477aa)
Serine endoprotease n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKF7_AZOBR
Protease Do {ECO:0000313|EMBL:GAK44837.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
degP2; serine endoprotease
SCNpilot_cont_1000_p_scaffold_5459_curated_4

Not on your lists

3457..4578
DNA (1122bp) protein (374aa)
sodium:proton antiporter n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B4BEA7
ParA/MinD ATPase like {ECO:0000313|EMBL:AIA18226.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning
SCNpilot_cont_1000_p_scaffold_5459_curated_5

Not on your lists

comp(4579..5052)
DNA (474bp) protein (158aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Dihydrofolate reductase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NE43_9SPHN
dihydrofolate reductase
SCNpilot_cont_1000_p_scaffold_5459_curated_6

Not on your lists

comp(5063..5545)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Salinimonas chungwhensis RepID=UPI000365A3AA
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:AIA14961.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
acetyltransferase, GNAT family
SCNpilot_cont_1000_p_scaffold_5459_curated_7

Not on your lists

5648..6403
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T4Y2_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:AIA17385.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5459_curated_8
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6580..7659
DNA (1080bp) protein (360aa)
adenylosuccinate synthase; K01939 adenylosuccinate synthase [EC:6.3.4.4]
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00011};; IMP--aspartate ligase {ECO:0000255|HAMAP-Rule:MF_00011}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
PREDICTED: adenylosuccinate synthetase 1, chloroplastic-like, partial n=1 Tax=Pantholops hodgsonii RepID=UPI0003C17609
Displaying 8 items

View Taxonomy