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SCNpilot_cont_1000_p_scaffold_3242_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3242_curated_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1443)
DNA (1443bp) protein (481aa)
nitrate reductase subunit alpha (EC:1.7.99.4); K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4]
Nitrate reductase, alpha subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3B4_9BRAD
Respiratory nitrate reductase 1 alpha chain {ECO:0000313|EMBL:CEG07063.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_cont_1000_p_scaffold_3242_curated_2
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1453..2709)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000379EF35
major facilitator transporter; K02575 MFS transporter, NNP family, nitrate/nitrite transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABI66994.1}; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Maricaulis maris (strain MCS10).;"
SCNpilot_cont_1000_p_scaffold_3242_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2959..3639
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036526C8
Crp/Fnr family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_1000_p_scaffold_3242_curated_4
unknown

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3636..3788
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3242_curated_5
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3788..5005
DNA (1218bp) protein (406aa)
NnrS protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J7A3_9PROT
NnrS protein {ECO:0000313|EMBL:EKE78981.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
NnrS protein
SCNpilot_cont_1000_p_scaffold_3242_curated_6
unknown

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5110..5361
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3242_curated_7
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5332..5712)
DNA (381bp) protein (127aa)
Integrase family protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UAL8_9GAMM
Integrase family protein {ECO:0000313|EMBL:EGV18770.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
Phage integrase
SCNpilot_cont_1000_p_scaffold_3242_curated_8
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6111..6434
DNA (324bp) protein (108aa)
UPF0145 protein BRAO285_970016 n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S7W3_9BRAD
UPF0145 protein LF63_0113405 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3242_curated_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6438..6728
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRH1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89812.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_1000_p_scaffold_3242_curated_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6801..7751
DNA (951bp) protein (317aa)
NADH-ubiquinone oxidoreductase 39 kDa subunit; K00329 NADH dehydrogenase [EC:1.6.5.3]; K00356 NADH dehydrogenase [EC:1.6.99.3]
NADH-ubiquinone oxidoreductase 39 kDa subunit n=1 Tax=Oceanibaculum indicum P24 RepID=K2KHV6_9PROT
NADH-ubiquinone oxidoreductase 39 kDa subunit {ECO:0000313|EMBL:EKE76880.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_cont_1000_p_scaffold_3242_curated_11
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7762..8568)
DNA (807bp) protein (269aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
bacA; UDP-diphosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
Undecaprenyl-diphosphatase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NQR0_AZOS1
SCNpilot_cont_1000_p_scaffold_3242_curated_12
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8675..9361
DNA (687bp) protein (229aa)
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-]
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T3A3_CAUSK
SCNpilot_cont_1000_p_scaffold_3242_curated_13
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9502..10146
DNA (645bp) protein (215aa)
Glutathione S-transferase n=1 Tax=Gluconobacter morbifer G707 RepID=G6XLN6_9PROT
Glutathione S-transferase domain-containing protein {ECO:0000313|EMBL:GAK45363.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
glutathione S-transferase
SCNpilot_cont_1000_p_scaffold_3242_curated_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10127..11242
DNA (1116bp) protein (372aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Epoxyqueuosine reductase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21C71_RHOPB
4Fe-4S ferredoxin
SCNpilot_cont_1000_p_scaffold_3242_curated_15
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11232..11978)
DNA (747bp) protein (249aa)
FOG: TPR repeat n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FRN7_PHAMO
TPR repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_cont_1000_p_scaffold_3242_curated_16
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12070..13443
DNA (1374bp) protein (458aa)
Ste24 endopeptidase (EC:3.4.24.84); K06013 STE24 endopeptidase [EC:3.4.24.84]
peptidase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B6D947
Tax=GWE2_Bacteroidetes_32_14_curated
SCNpilot_cont_1000_p_scaffold_3242_curated_17
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13697..14701)
DNA (1005bp) protein (335aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17]
ATP phosphoribosyltransferase n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YYY8_9RHIZ
SCNpilot_cont_1000_p_scaffold_3242_curated_18
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14698..15864)
DNA (1167bp) protein (389aa)
ATP phosphoribosyltransferase regulatory subunit {ECO:0000313|EMBL:CDO60348.1}; EC=2.4.2.17 {ECO:0000313|EMBL:CDO60348.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
Histidine--tRNA ligase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQN9_PARL1
hisZ; ATP phosphoribosyltransferase regulatory subunit; K02502 ATP phosphoribosyltransferase regulatory subunit
Displaying 18 items

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