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SCNpilot_cont_1000_p_scaffold_4502_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_4502_curated_1
unknown

Not on your lists

comp(2..526)
DNA (525bp) protein (175aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4502_curated_2
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(523..729)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WKC5_PANSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU71537.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
SCNpilot_cont_1000_p_scaffold_4502_curated_3
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(726..2123)
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037B9592
Uncharacterized protein {ECO:0000313|EMBL:EXF45281.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. BAY1663.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4502_curated_4
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2113..4131)
DNA (2019bp) protein (673aa)
gene transfer agent (GTA) n=1 Tax=Loktanella vestfoldensis RepID=UPI000364D211
Gene transfer agent (GTA) {ECO:0000313|EMBL:KFI29430.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4502_curated_5
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4179..4805)
DNA (627bp) protein (209aa)
UPI0003D6D545 related cluster n=1 Tax=unknown RepID=UPI0003D6D545
Glycoside hydrolase family 24 {ECO:0000313|EMBL:KGJ23550.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4502_curated_6
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4876..5403)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UK32_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAP88813.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4502_curated_7
unknown

Not on your lists

comp(5393..5557)
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002E13C81
SCNpilot_cont_1000_p_scaffold_4502_curated_8
Hyphomonas jannaschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5557..5892)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00037D28E3
Uncharacterized protein {ECO:0000313|EMBL:KCZ89571.1}; TaxID=1280952 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas jannaschiana VP2.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4502_curated_9
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5907..6323)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UK28_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAP88809.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
TP901-1 family phage major tail protein
SCNpilot_cont_1000_p_scaffold_4502_curated_10
unknown

Not on your lists

comp(6349..6894)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030726B8
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4502_curated_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7207..8445)
DNA (1239bp) protein (413aa)
Phage major capsid protein, HK97 family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRJ6_PARL1
HK97 family phage major capsid protein
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:ABS62529.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_4502_curated_12
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8468..8965)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EA3B57
phage prohead protease, HK97 family protein; K06904
Peptidase U35 {ECO:0000313|EMBL:KIX19271.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;"
Displaying 12 items

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