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SCNpilot_cont_1000_p_scaffold_2900_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2900_curated_1
unknown

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comp(3..185)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036102CE
SCNpilot_cont_1000_p_scaffold_2900_curated_2
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(182..931)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003790045
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI82185.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
SCNpilot_cont_1000_p_scaffold_2900_curated_3
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(918..1817)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Burkholderia ubonensis RepID=UPI00016A48A5
UPF0276 protein KY49_5882 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2900_curated_4
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1824..2087)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035E9B04
Uncharacterized protein {ECO:0000313|EMBL:EKM98597.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2900_curated_5
unknown

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comp(2226..2894)
DNA (669bp) protein (223aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2900_curated_6
unknown

Not on your lists

comp(2997..3185)
DNA (189bp) protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:CPR19246.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_cont_1000_p_scaffold_2900_curated_7
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3329..3583)
DNA (255bp) protein (85aa)
membrane protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B41320
Uncharacterized protein {ECO:0000313|EMBL:AJD40173.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2900_curated_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3580..4350)
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Burkholderia RepID=K0DVC7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:GAN45003.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2900_curated_9
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4437..5657
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003646AEA
Uncharacterized protein {ECO:0000313|EMBL:AJZ63235.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2900_curated_10
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5667..6299
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003732391
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL49008.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_1000_p_scaffold_2900_curated_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(6318..6653)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN01_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41749.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
SCNpilot_cont_1000_p_scaffold_2900_curated_12
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6704..7180)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CAB70
Uncharacterized protein {ECO:0000313|EMBL:EQA96931.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2900_curated_13
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7335..7703)
DNA (369bp) protein (123aa)
DGPFAETKE family protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FQH2_9RHIZ
DGPFAETKE family protein {ECO:0000313|EMBL:ESX82856.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2900_curated_14
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7812..10151)
DNA (2340bp) protein (780aa)
ATPase P; K01535 H+-transporting ATPase [EC:3.6.3.6]
Plasma-membrane proton-efflux P-type ATPase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CU68_SIDLE
Cation transporter ATPase {ECO:0000313|EMBL:GAJ30529.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
SCNpilot_cont_1000_p_scaffold_2900_curated_15
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10344..11261)
DNA (918bp) protein (306aa)
UPI0003CF3803 related cluster n=1 Tax=unknown RepID=UPI0003CF3803
NADPH:quinone reductase {ECO:0000313|EMBL:ESY67357.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
alcohol dehydrogenase GroES domain-containing protein
SCNpilot_cont_1000_p_scaffold_2900_curated_16
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11364..12218
DNA (855bp) protein (285aa)
Putative transcriptional regulator, AraC/XylS family n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4Z2A2_BRASO
AraC family transcriptional regulator
Putative transcriptional regulator, AraC/XylS family {ECO:0000313|EMBL:CAL80278.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCNpilot_cont_1000_p_scaffold_2900_curated_17
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12274..12678)
DNA (405bp) protein (135aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSA9_PARL1
Displaying 17 items

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