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SCNpilot_cont_1000_p_scaffold_7275_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_7275_curated_1
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..311
DNA (309bp) protein (103aa)
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=SYS_AZOC5
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_cont_1000_p_scaffold_7275_curated_2
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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311..1090
DNA (780bp) protein (260aa)
surE; stationary phase survival protein SurE; K03787 5'-nucleotidase [EC:3.1.3.5]
5'-nucleotidase SurE {ECO:0000255|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000255|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000255|HAMAP-Rule:MF_00060}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
stationary phase survival protein SurE n=1 Tax=Ochrobactrum anthropi RepID=UPI00028885E2
SCNpilot_cont_1000_p_scaffold_7275_curated_3
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1204..1911
DNA (708bp) protein (236aa)
Lipoprotein NlpD n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CQM7_9RHOB
putative peptidoglycan-binding LysM
Lipoprotein NlpD {ECO:0000313|EMBL:EFO29770.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
SCNpilot_cont_1000_p_scaffold_7275_curated_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1908..2786)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXK8_PARL1
hypothetical protein; K06923
Uncharacterized protein {ECO:0000313|EMBL:ABS64641.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_p_scaffold_7275_curated_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2867..3169
DNA (303bp) protein (101aa)
Preprotein translocase, auxillary membrane component (General Secretory Pathway), YajC subunit n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J669_HYPSM
yajC; preprotein translocase, auxillary membrane component; K03210 preprotein translocase subunit YajC
Preprotein translocase, auxillary membrane component (General Secretory Pathway), YajC subunit {ECO:0000313|EMBL:CCB65894.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_1000_p_scaffold_7275_curated_6
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3176..4789
DNA (1614bp) protein (538aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003739420
Preprotein translocase subunit SecD/SecF {ECO:0000313|EMBL:AJY47142.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD
SCNpilot_cont_1000_p_scaffold_7275_curated_7
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4791..5615
DNA (825bp) protein (275aa)
putative phytoene synthase; K02291 phytoene synthase [EC:2.5.1.32]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000306261C
Putative phytoene synthase {ECO:0000313|EMBL:ABS64647.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Displaying 7 items

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