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SCNpilot_cont_300_bf_scaffold_3102

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3102_1
unknown

Not on your lists

comp(3..152)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3102_2
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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288..743
DNA (456bp) protein (152aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AIY8_RHIFH
putative transcriptional regulator, AsnC family
Putative HTH-type transcriptional regulator y4sM {ECO:0000313|EMBL:AFL48849.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer g
SCNpilot_cont_300_bf_scaffold_3102_3
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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885..2306
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030347F2
voltage-gated chloride channel
Putative chloride channel family protein {ECO:0000313|EMBL:AEI06361.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Olig
SCNpilot_cont_300_bf_scaffold_3102_4
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2399..3151
DNA (753bp) protein (251aa)
Putative integral membrane transmembrane protein n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NEF8_RALSL
Membrane protein {ECO:0000313|EMBL:KFF30207.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.
putative integral membrane transmembrane protein
SCNpilot_cont_300_bf_scaffold_3102_5
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3182..3787)
DNA (606bp) protein (202aa)
Transcriptional regulator TetR family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0F0W6_CUPNN
TetR family transcriptional regulator {ECO:0000313|EMBL:KFA91545.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3102_6
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3968..5098
DNA (1131bp) protein (377aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWL8_PARL1 rbh
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ABS64301.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibacu
SCNpilot_cont_300_bf_scaffold_3102_7
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5148..5456
DNA (309bp) protein (103aa)
UPI0003CEAC01 related cluster n=1 Tax=unknown RepID=UPI0003CEAC01
Uncharacterized protein {ECO:0000313|EMBL:ESX41984.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
SCNpilot_cont_300_bf_scaffold_3102_8
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5487..6497)
DNA (1011bp) protein (337aa)
hypothetical protein Tax=GWD2_Desulfuromonadales_54_10_curated
Abi family protein id=2250709 bin=GWB2_Pelobacter_53_15 species=Citreicella sp. SE45 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3102_9
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6819..8819
DNA (2001bp) protein (667aa)
ParB domain protein nuclease n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SV44_CAUSK
nuclease
ParB domain protein nuclease {ECO:0000313|EMBL:ABZ72934.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter s
SCNpilot_cont_300_bf_scaffold_3102_10
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9234..9926
DNA (693bp) protein (231aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aur
DNA methylase N-4/N-6 domain protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B7D6_PARDP
DNA methylase N-4/N-6 domain-containing protein
SCNpilot_cont_300_bf_scaffold_3102_11
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10493..10696
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UD58_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW10839.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3102_12
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10791..11093)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FV9_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG63716.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp.
SCNpilot_cont_300_bf_scaffold_3102_13
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11470..12612
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SV47_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ72937.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (s
SCNpilot_cont_300_bf_scaffold_3102_14
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12754..12975)
DNA (222bp) protein (74aa)
Transcriptional regulator, XRE family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FV8_MESSB
Transcriptional regulator {ECO:0000313|EMBL:KKC25913.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
XRE family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3102_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13188..13451
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAN7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38616.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3102_16
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13610..14347
DNA (738bp) protein (246aa)
UPI0003D03E74 related cluster n=1 Tax=unknown RepID=UPI0003D03E74
Uncharacterized protein {ECO:0000313|EMBL:ESZ86671.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3102_17
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14549..14830
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDB9_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS66012.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrop
SCNpilot_cont_300_bf_scaffold_3102_18
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14836..15312
DNA (477bp) protein (159aa)
UPI0003D679CC related cluster n=1 Tax=unknown RepID=UPI0003D679CC
Uncharacterized protein {ECO:0000313|EMBL:ETI60093.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3102_19
Acetobacter tropicalis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15309..15824
DNA (516bp) protein (172aa)
conjugal transfer protein TraF n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B48199
Type IV secretory pathway, protease TraF {ECO:0000313|EMBL:KGB24760.1}; TaxID=104102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="
traF; conjugal transfer protein traF
SCNpilot_cont_300_bf_scaffold_3102_20
unknown

Not on your lists

comp(15781..16056)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3102_21
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16656..17144
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00035CE895
Uncharacterized protein {ECO:0000313|EMBL:KGJ08955.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus
hypothetical protein
Displaying 21 items

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