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SCNpilot_cont_300_bf_scaffold_6172

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_6172_1
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..447
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036CF1B6
hmuU; Hemin transport system permease protein HmuU
Hemin transport system permease protein HmuU {ECO:0000313|EMBL:AEV34933.1}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" sour
SCNpilot_cont_300_bf_scaffold_6172_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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522..1307
DNA (786bp) protein (262aa)
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=69974 specie
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037A19CF rbh
ABC transporter component for heme transport
SCNpilot_cont_300_bf_scaffold_6172_3
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1456..3030
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A44C4 rbh
Putative xylulose kinase {ECO:0000313|EMBL:EIM77357.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireducto
putative xylulose kinase
SCNpilot_cont_300_bf_scaffold_6172_4
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3096..4010
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00038228B4 rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:EIM77358.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="N
LacI family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_6172_5
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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4007..5590
DNA (1584bp) protein (528aa)
rbsA; RbsA (EC:3.6.3.17)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisserial
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000364254B rbh
SCNpilot_cont_300_bf_scaffold_6172_6
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5587..6216
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003743958
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AJY74157.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
SCNpilot_cont_300_bf_scaffold_6172_7
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6159..6476
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003743958
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AJY74157.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
SCNpilot_cont_300_bf_scaffold_6172_8
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6547..7173
DNA (627bp) protein (209aa)
Dienelactone hydrolase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JB42_AGRRK
Dienelactone hydrolase {ECO:0000313|EMBL:KGD92101.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
Alanine rich hydrolase
SCNpilot_cont_300_bf_scaffold_6172_9
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7133..7237
DNA (105bp) protein (35aa)
Dienelactone hydrolase-like enzyme n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZE4_9RHIZ
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:EIM29336.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirg
dienelactone hydrolase-like enzyme
SCNpilot_cont_300_bf_scaffold_6172_10
Pseudomonas sp. GM79, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7258..8169)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003600A73 rbh
Putative permease {ECO:0000313|EMBL:EJN20824.1}; Flags: Precursor;; TaxID=1144338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
permease
SCNpilot_cont_300_bf_scaffold_6172_11
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8166..8885)
DNA (720bp) protein (240aa)
Enolase-phosphatase E1 {ECO:0000256|HAMAP-Rule:MF_01681}; EC=3.1.3.77 {ECO:0000256|HAMAP-Rule:MF_01681};; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase {ECO:0000256|HAMAP-Rule:MF_01681}; TaxID=
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036CC4C1 rbh
masA; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase
SCNpilot_cont_300_bf_scaffold_6172_12
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8972..10066
DNA (1095bp) protein (365aa)
mtnA; 5-methylthioribose-1-phosphate isomerase; K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
translation initiation factor, aIF-2BI family (EC:5.3.1.23)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003694AB5 rbh
SCNpilot_cont_300_bf_scaffold_6172_13
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10067..10837)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DA07_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KGT79618.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japoni
hypothetical protein
SCNpilot_cont_300_bf_scaffold_6172_14
Leptospira broomii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

11313..11624
DNA (312bp) protein (104aa)
DNA-binding helix-turn-helix protein n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0GIM0_9LEPT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EQA46669.1}; TaxID=1049789 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira broomii serovar Hurst
regulatory protein ArsR
SCNpilot_cont_300_bf_scaffold_6172_15
Kaistia granuli, Kaistia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11680..12018)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037055F4
SCNpilot_cont_300_bf_scaffold_6172_16
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12240..12776
DNA (537bp) protein (179aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-
3-hydroxydecanoyl-ACP dehydratase n=1 Tax=Kaistia granuli RepID=UPI00037C28D6
fabA; 3-hydroxydecanoyl-ACP dehydratase
SCNpilot_cont_300_bf_scaffold_6172_17
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12944..13423
DNA (480bp) protein (160aa)
3-oxoacyl-(acyl carrier protein) synthase I (EC:2.3.1.41)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NS20_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33167.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
Displaying 17 items

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