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SCNpilot_cont_300_bf_scaffold_6715

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_6715_1
unknown

Not on your lists

comp(1..75)
DNA (75bp) protein (25aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_6715_2
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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186..1991
DNA (1806bp) protein (602aa)
DNA polymerase III, subunits gamma and tau, putative {ECO:0000313|EMBL:EEE43267.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEE43267.1};; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhod
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037280BF rbh
DNA polymerase III subunits gamma and tau
SCNpilot_cont_300_bf_scaffold_6715_3
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2031..2354
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000362D20E
hypothetical protein
Nucleoid-associated protein Xaut_2167 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xan
SCNpilot_cont_300_bf_scaffold_6715_4
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2398..2958
DNA (561bp) protein (187aa)
recombinase RecR n=1 Tax=Kaistia granuli RepID=UPI00035F0F75
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitr
recombination protein RecR
SCNpilot_cont_300_bf_scaffold_6715_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3140..3754
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036DDE2E rbh
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_6715_6
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3732..4142)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036CD023
Uncharacterized protein {ECO:0000313|EMBL:KFG68209.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.
putative membrane protein
SCNpilot_cont_300_bf_scaffold_6715_7
Brucella sp. 83/13, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4146..4889)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037EBEEC
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEZ33996.1}; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. 83/13.;
SCNpilot_cont_300_bf_scaffold_6715_8
unknown

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5029..5367
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_6715_9
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5478..6032
DNA (555bp) protein (185aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
def1; peptide deformylase (EC:3.5.1.88)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003617F34 rbh
SCNpilot_cont_300_bf_scaffold_6715_10
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6040..6306
DNA (267bp) protein (89aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=384765 species="B
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035EF39E
fmt; methionyl-tRNA formyltransferase
SCNpilot_cont_300_bf_scaffold_6715_11
Brucella inopinata, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6418..6972
DNA (555bp) protein (185aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=470735 species="B
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035EF39E
SCNpilot_cont_300_bf_scaffold_6715_12
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7269..7712
DNA (444bp) protein (148aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000369B596
SCNpilot_cont_300_bf_scaffold_6715_13
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7730..8182)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003681803
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV35568.1}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp.
SCNpilot_cont_300_bf_scaffold_6715_14
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8196..9350)
DNA (1155bp) protein (385aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rul
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003821C4F rbh
dapE; acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-like deacylase
SCNpilot_cont_300_bf_scaffold_6715_15
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9427..10278)
DNA (852bp) protein (284aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAA
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Kaistia granuli RepID=UPI00037086DC rbh
SCNpilot_cont_300_bf_scaffold_6715_16
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10526..11863)
DNA (1338bp) protein (446aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3J3D1_9RHIZ rbh
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:EMG53476.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;
outer membrane receptor for ferrienterochelin and colicins
Displaying 16 items

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