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SCNpilot_cont_300_bf_scaffold_1262

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1262_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(722..1585)
DNA (864bp) protein (288aa)
carbonate dehydratase (EC:4.2.1.1)
Carbonate dehydratase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBU8_NITMU
Carbonate dehydratase {ECO:0000313|EMBL:KIO50409.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. Np
SCNpilot_cont_300_bf_scaffold_1262_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1767..3008)
DNA (1242bp) protein (414aa)
PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN n=1 Tax=Nitrosospira sp. APG3 RepID=M5DT25_9PROT rbh
PUTATIVE TRANSPORT TRANSMEMBRANE PROTEIN {ECO:0000313|EMBL:CCU62555.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source
major facilitator transporter
SCNpilot_cont_300_bf_scaffold_1262_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3220..4134)
DNA (915bp) protein (305aa)
PROBABLE CONSERVED LIPOPROTEIN LPQO n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIQ1_9PROT
PROBABLE CONSERVED LIPOPROTEIN LPQO {ECO:0000313|EMBL:CCU62554.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nit
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1262_4
unknown

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4530..5045
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1262_5
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5911..6822
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034A3FBE rbh
ChrB
ChrB {ECO:0000313|EMBL:AJW47596.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
SCNpilot_cont_300_bf_scaffold_1262_6
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6826..8010
DNA (1185bp) protein (395aa)
chromate transporter n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00035FFA8A rbh
Chromate transport protein ChrA
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22597.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
SCNpilot_cont_300_bf_scaffold_1262_7
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8443..8625
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:CAZ15899.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albili
SCNpilot_cont_300_bf_scaffold_1262_8
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8632..11625)
DNA (2994bp) protein (998aa)
Transposase for transposon Tn5044 n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4P5_9XANT rbh
Tn5044 transposase {ECO:0000313|EMBL:GAE55943.1}; TaxID=1418095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola
tranposase
SCNpilot_cont_300_bf_scaffold_1262_9
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11633..12907)
DNA (1275bp) protein (425aa)
Integrase-like protein n=2 Tax=Xanthomonas RepID=Q8PRL1_XANAC rbh
Phage integrase family
Integrase-like protein {ECO:0000313|EMBL:AGH78711.1}; TaxID=1304892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonop
SCNpilot_cont_300_bf_scaffold_1262_10
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13129..14157
DNA (1029bp) protein (343aa)
Cointegrate resolution protein T n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KNN3_STEMA rbh
Transposase {ECO:0000313|EMBL:KGM51412.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS
cointegrate resolution protein T
SCNpilot_cont_300_bf_scaffold_1262_11
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(14351..14719)
DNA (369bp) protein (123aa)
SnoaL-like polyketide cyclase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A888_DEIPD
SnoaL-like polyketide cyclase
SnoaL-like polyketide cyclase {ECO:0000313|EMBL:AFZ69285.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridi
SCNpilot_cont_300_bf_scaffold_1262_12
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14832..15161)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSZ5_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1262_13
unknown

Not on your lists

comp(15232..15468)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1262_14
Pseudomonas alkylphenolia, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15524..16777)
DNA (1254bp) protein (418aa)
hydrogen cyanide synthase HcnC n=1 Tax=Pseudomonas RepID=UPI00037D629D
hydrogen cyanide synthase HcnC
Hydrogen cyanide synthase HcnC {ECO:0000313|EMBL:AIL64388.1}; TaxID=237609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
SCNpilot_cont_300_bf_scaffold_1262_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16774..18228)
DNA (1455bp) protein (485aa)
FAD dependent oxidoreductase Tax=GWA2_Rokubacteria_70_23_curated
Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster id=4600709 bin=GWC2_Methylomirabilis_70_16 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hcnB; hydrogen cyanide synthase HcnB
SCNpilot_cont_300_bf_scaffold_1262_16
unknown

Not on your lists

comp(18225..18470)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1262_17
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18789..21191)
DNA (2403bp) protein (801aa)
Copper/silver-translocating P-type ATPase n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z802_BELBD
copper/silver-translocating P-type ATPase
Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:AFL85370.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella balt
SCNpilot_cont_300_bf_scaffold_1262_18
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21204..21893)
DNA (690bp) protein (230aa)
thiol:disulfide interchange protein id=12556476 bin=CNBR_ACIDO species=Nafulsella turpanensis genus=Nafulsella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thiol:disulfide interchange protein
Thiol:disulfide interchange protein {ECO:0000313|EMBL:AFL85372.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (s
SCNpilot_cont_300_bf_scaffold_1262_19
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21890..22252)
DNA (363bp) protein (121aa)
copper chaperone id=12556458 bin=CNBR_ACIDO species=Nafulsella turpanensis genus=Nafulsella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
copper chaperone
Copper chaperone {ECO:0000313|EMBL:AFL85371.1}; Flags: Precursor;; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (s
SCNpilot_cont_300_bf_scaffold_1262_20
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22239..22682)
DNA (444bp) protein (148aa)
MerR family transcriptional regulator {ECO:0000313|EMBL:ETW95374.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella
Transcriptional regulator, MerR family id=3552008 bin=GWC2_Proteo_65_14_Ab886 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
MerR family transcriptional regulator
Displaying 20 items

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