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SCNpilot_cont_300_bf_scaffold_1429

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1429_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2..268
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKK8_9PROT
Twitching motility protein PilT {ECO:0000313|EMBL:KIO50120.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrososp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1429_2
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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580..1572
DNA (993bp) protein (331aa)
Integrase family protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JP62_9GAMM
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AEM48477.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Aci
SCNpilot_cont_300_bf_scaffold_1429_3
unknown

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1931..2383
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1429_4
unknown

Not on your lists

2385..2690
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1429_5
unknown

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2680..2895
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1429_6
unknown

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2885..3403
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1429_7

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3394..3975
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Methylophilales phage HIM624-A RepID=H6BJ59_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:AFB70769.1}; TaxID=889949 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA phages.;" source="Methylophilales phage HIM624-A.;"
SCNpilot_cont_300_bf_scaffold_1429_8
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3983..5188
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EWI3_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDK97549.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
SCNpilot_cont_300_bf_scaffold_1429_9
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5907..7271)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Aeromonas veronii Hm21 RepID=U1HB55_9GAMM rbh
KAP P-loop domain-containing protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
KAP P-loop domain-containing protein
SCNpilot_cont_300_bf_scaffold_1429_10
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7360..7635)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4S0_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27153.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
SCNpilot_cont_300_bf_scaffold_1429_11
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8759..9091)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003783698
Uncharacterized protein {ECO:0000313|EMBL:KGO35540.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus
putative metal-dependent hydrolase
SCNpilot_cont_300_bf_scaffold_1429_12

Not on your lists

comp(9223..10704)
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003670556 rbh
restriction enzyme type I helicase subunit
Marine sediment metagenome DNA, contig: S01H1_S24643 {ECO:0000313|EMBL:GAG18676.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
SCNpilot_cont_300_bf_scaffold_1429_13
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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11032..11304
DNA (273bp) protein (91aa)
CopG family transcriptional regulator n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023768AA
CopG family transcriptional regulator {ECO:0000313|EMBL:ERS11340.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="A
CopG family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1429_14
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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11292..11585
DNA (294bp) protein (98aa)
Plasmid stabilization system n=1 Tax=Thauera sp. 27 RepID=N6X3J5_9RHOO
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:ENO76266.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
SCNpilot_cont_300_bf_scaffold_1429_15
unknown

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11588..11737
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1429_16
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11738..12583)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Escherichia coli STEC_DG131-3 RepID=G2AGF7_ECOLX
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
Hypothetical protein
SCNpilot_cont_300_bf_scaffold_1429_17
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12594..12842)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZDC7_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ27836.1}; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp.
SCNpilot_cont_300_bf_scaffold_1429_18
unknown

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12844..13020
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying 18 items

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