ggKbase home page

SCNpilot_cont_300_bf_scaffold_1457

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1457_1
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1033
DNA (1032bp) protein (344aa)
Monooxygenase n=1 Tax=Nitratireductor indicus C115 RepID=K2NKC6_9RHIZ rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KGJ22102.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" sourc
flavin-containing monooxygenase
SCNpilot_cont_300_bf_scaffold_1457_2
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1133..1963)
DNA (831bp) protein (277aa)
Phosphonate ABC transporter, inner membrane subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IME6_XANP2 rbh
phosphonate ABC transporter inner membrane subunit
Phosphonate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABS69189.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" s
SCNpilot_cont_300_bf_scaffold_1457_3
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1951..2757)
DNA (807bp) protein (269aa)
Phosphonate ABC transporter, inner membrane subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IME5_XANP2 rbh
phosphonate ABC transporter inner membrane subunit
Phosphonate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABS69188.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" s
SCNpilot_cont_300_bf_scaffold_1457_4
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2754..3611)
DNA (858bp) protein (286aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhiz
Phosphonate ABC transporter, ATPase subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IME4_XANP2 rbh
phosphonate ABC transporter ATPase
SCNpilot_cont_300_bf_scaffold_1457_5
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3637..4605)
DNA (969bp) protein (323aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IME3_XANP2 rbh
phosphonate ABC transporter periplasmic phosphonate-binding protein
Phosphonate ABC transporter, periplasmic phosphonate-binding protein {ECO:0000313|EMBL:ABS69186.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
SCNpilot_cont_300_bf_scaffold_1457_6
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4599..5324)
DNA (726bp) protein (242aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBR8_XANP2
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABS65461.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthoba
SCNpilot_cont_300_bf_scaffold_1457_7
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5338..6069)
DNA (732bp) protein (244aa)
PhoU family transcriptional regulator n=1 Tax=Methylobacterium sp. MB200 RepID=UPI000348400E
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labr
phosphate uptake regulator PhoU
SCNpilot_cont_300_bf_scaffold_1457_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6116..6922)
DNA (807bp) protein (269aa)
pstB-2; phosphate ABC transporter ATP-binding protein PstB 2 (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
phosphate ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003661FAD rbh
SCNpilot_cont_300_bf_scaffold_1457_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6915..7772)
DNA (858bp) protein (286aa)
phosphate transporter permease subunit PtsA n=1 Tax=Rhizobium leguminosarum RepID=UPI000381DE7A rbh
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EJB03297.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
transmembrane component of ABC transporter
SCNpilot_cont_300_bf_scaffold_1457_10
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7774..8769)
DNA (996bp) protein (332aa)
phosphate ABC transporter permease n=1 Tax=Rhizobium leguminosarum RepID=UPI00036C7E21 rbh
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:EJJ27900.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhiz
transmembrane component of ABC transporter
SCNpilot_cont_300_bf_scaffold_1457_11
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8862..9887)
DNA (1026bp) protein (342aa)
Phosphate-binding protein PstS n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MIN3_RHIL3 rbh
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkhold
solute-binding component of ABC transporter
SCNpilot_cont_300_bf_scaffold_1457_12
CG_Gallio_01, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10207..10734)
DNA (528bp) protein (176aa)
protein-tyrosine phosphatase, low molecular weight; K03741 arsenate reductase [EC:1.20.4.1] Tax=CG_Gallio_01
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9W402_METEP
low molecular weight phosphotyrosine protein phosphatase
SCNpilot_cont_300_bf_scaffold_1457_13
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10765..11301)
DNA (537bp) protein (179aa)
Protein tyrosine phosphatase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QCV2_9RHIZ
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGF68268.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea s
protein-tyrosine phosphatase, low molecular weight
SCNpilot_cont_300_bf_scaffold_1457_14
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11385..12413)
DNA (1029bp) protein (343aa)
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriacea
Thioredoxin reductase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UER3_METS4
SCNpilot_cont_300_bf_scaffold_1457_15
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12494..13342)
DNA (849bp) protein (283aa)
Transcriptional regulator, ArsR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8C1_STAND
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADH88594.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya
SCNpilot_cont_300_bf_scaffold_1457_16
Ochrobactrum tritici, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13521..13856
DNA (336bp) protein (112aa)
ArsR1 n=1 Tax=Ochrobactrum tritici RepID=A1XP68_9RHIZ
ArsR1 {ECO:0000313|EMBL:ABF22608.1}; TaxID=94626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum tritici.;"
regulatory protein ArsR
SCNpilot_cont_300_bf_scaffold_1457_17
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13868..14929
DNA (1062bp) protein (354aa)
Arsenical-resistance protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAB3_OLICO
arsB1; arsenical-resistance protein
Putative arsenite efflux pump protein {ECO:0000313|EMBL:AEI05015.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotr
SCNpilot_cont_300_bf_scaffold_1457_18
unknown

Not on your lists

14971..15126
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1457_19
unknown

Not on your lists

15344..15952
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1457_20
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16083..16958
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031FA124 rbh
phosphate/phosphonate ABC transporter
Uncharacterized protein {ECO:0000313|EMBL:ABS69170.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xa
SCNpilot_cont_300_bf_scaffold_1457_21
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16963..18417
DNA (1455bp) protein (485aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Sta
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031227D3 rbh
integral membrane sensor signal transduction histidine kinase rbh
SCNpilot_cont_300_bf_scaffold_1457_22
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18407..19096
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DA86D9
two component sigma-54 specific Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADH88603.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteracea
Displaying 22 items

View Taxonomy