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SCNpilot_cont_300_bf_scaffold_1471

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1471_1
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..560)
DNA (558bp) protein (186aa)
kamA; L-lysine 2,3-aminomutase (EC:5.4.3.2)
L-lysine 2,3-aminomutase protein n=2 Tax=Rhizobium etli RepID=Q2K300_RHIEC
Lysine 2,3-aminomutase {ECO:0000313|EMBL:KKB86712.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
SCNpilot_cont_300_bf_scaffold_1471_2
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(557..1735)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000361A03A
Fosmidomycin resistance protein {ECO:0000313|EMBL:KEZ18699.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
major Facilitator Superfamily protein
SCNpilot_cont_300_bf_scaffold_1471_3
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1797..2876)
DNA (1080bp) protein (360aa)
lysine--tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000313|EMBL:ABZ69893.1}; EC=6.1.1.6 {ECO:0000313|EMBL:ABZ69893.1};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Ca
Lysine--tRNA ligase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SUL5_CAUSK
SCNpilot_cont_300_bf_scaffold_1471_4

Not on your lists

2941..3654
DNA (714bp) protein (238aa)
Alpha/beta hydrolase fold n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A9A049_DESOH
Uncharacterized protein {ECO:0000313|EMBL:KKL19524.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_300_bf_scaffold_1471_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3736..4305
DNA (570bp) protein (190aa)
Elongation factor P n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z014_9RHIZ
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriac
elongation factor P
SCNpilot_cont_300_bf_scaffold_1471_6
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4447..5874)
DNA (1428bp) protein (476aa)
Aldehyde Dehydrogenase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X051_COMTE
Aldehyde dehydrogenase {ECO:0000313|EMBL:GAK46218.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
aldehyde dehydrogenase
SCNpilot_cont_300_bf_scaffold_1471_7
unknown

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comp(6053..6646)
DNA (594bp) protein (198aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1471_8
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6887..7411
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI000364C487
NADPH-dependent FMN reductase {ECO:0000313|EMBL:EHP38434.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus
NADPH-dependent FMN reductase
SCNpilot_cont_300_bf_scaffold_1471_9
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7465..7890
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QF51_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG58407.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1471_10
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7906..8913)
DNA (1008bp) protein (336aa)
Exo-beta-1 3-glucanase-like protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQE7_PARL1 rbh
exo-beta-1 3-glucanase-like protein
Exo-beta-1 3-glucanase-like protein {ECO:0000313|EMBL:ABS62130.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" so
SCNpilot_cont_300_bf_scaffold_1471_11
unknown

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comp(14666..15325)
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1471_12
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15422..15853)
DNA (432bp) protein (144aa)
Putative CBS domain protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YNB0_MOBAS
Putative CBS domain protein {ECO:0000313|EMBL:EAS51121.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidiz
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1471_13
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16278..17543)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEA4_9BRAD rbh
NADH dehydrogenase {ECO:0000313|EMBL:ETR77138.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
NADH dehydrogenase, FAD-containing subunit
SCNpilot_cont_300_bf_scaffold_1471_14
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17544..18092)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HTT2_PSEUO
HhH-GPD domain protein {ECO:0000313|EMBL:ETM67127.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (str
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1471_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18105..18314)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLK3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62894.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_1471_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18376..19188)
DNA (813bp) protein (271aa)
Linocin-M18 n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HQI6_PSEUO rbh
Bacteriocin {ECO:0000313|EMBL:KIO48426.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Linocin_M18 bacteriocin protein
SCNpilot_cont_300_bf_scaffold_1471_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19181..20221)
DNA (1041bp) protein (347aa)
Iron-dependent peroxidase n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JP43_AGRRK rbh
Peroxidase {ECO:0000313|EMBL:KIO48427.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
iron-dependent peroxidase
SCNpilot_cont_300_bf_scaffold_1471_18
unknown

Not on your lists

20846..21004
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1471_19
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21102..22082)
DNA (981bp) protein (327aa)
Enoyl-[acyl-carrier-protein] reductase [FMN] {ECO:0000313|EMBL:CDO59399.1}; EC=1.3.1.9 {ECO:0000313|EMBL:CDO59399.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus
2-nitropropane dioxygenase NPD n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G581_ALIDK
2-nitropropane dioxygenase
SCNpilot_cont_300_bf_scaffold_1471_20
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22291..23784
DNA (1494bp) protein (498aa)
UPF0061 protein MmSR116_2450 n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y6E8_9RHIZ rbh
UPF0061 protein MmSR116_2450 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methy
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1471_21
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23938..24345
DNA (408bp) protein (136aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 PF8_9GAMM">RepID=I4WPF8_9GAMM
Epimerase {ECO:0000313|EMBL:KJC48760.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
nucleoside-diphosphate-sugar epimerase
SCNpilot_cont_300_bf_scaffold_1471_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24444..24932
DNA (489bp) protein (163aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIA5_9GAMM
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGG89403.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
SCNpilot_cont_300_bf_scaffold_1471_23
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24929..25087
DNA (159bp) protein (53aa)
Alpha-L-fucosidase|GH29 {ECO:0000313|EMBL:CDO59692.1}; EC=3.2.1.51 {ECO:0000313|EMBL:CDO59692.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;"
alpha-L-fucosidase (EC:3.2.1.51)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003810CB4
Displaying 23 items

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