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SCNpilot_cont_300_bf_scaffold_1578

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1578_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..721
DNA (720bp) protein (240aa)
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQD9_9GAMM
FMN-dependent alpha-hydroxy acid dehydrogenase {ECO:0000313|EMBL:EIJ33582.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thi
alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase
SCNpilot_cont_300_bf_scaffold_1578_2
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(755..3913)
DNA (3159bp) protein (1053aa)
Heavy metal efflux pump, CzcA family n=1 Tax=gamma proteobacterium HdN1 RepID=E1VMD2_9GAMM rbh
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:KIL99092.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhod
Heavy metal efflux pump, CzcA family
SCNpilot_cont_300_bf_scaffold_1578_3
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3953..5089)
DNA (1137bp) protein (379aa)
Secretion protein HlyD n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47CS4_DECAR
Cobalt/zinc/cadmium efflux RND transporter membrane fusion protein CzcB family {ECO:0000313|EMBL:KIL99091.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rho
secretion protein HlyD
SCNpilot_cont_300_bf_scaffold_1578_4
unknown

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comp(5135..6241)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037E8FC9 rbh
Putative Cobalt-zinc-cadmium resistance protein CzcC {ECO:0000313|EMBL:CPR19070.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.
heavy metal RND efflux outer membrane protein, CzcC family
SCNpilot_cont_300_bf_scaffold_1578_5
unknown

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comp(6257..6487)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1578_6
unknown

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comp(7542..7730)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1578_7
unknown

Not on your lists

8003..8419
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1578_8
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8542..9819
DNA (1278bp) protein (426aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRM8_HYPDA
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADJ22257.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hypho
SCNpilot_cont_300_bf_scaffold_1578_9
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9833..12058
DNA (2226bp) protein (742aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRM7_HYPDA
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ADJ22256.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobi
CzcA family heavy metal efflux pump
SCNpilot_cont_300_bf_scaffold_1578_10
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12079..13035
DNA (957bp) protein (319aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRM7_HYPDA
CzcA family heavy metal efflux pump
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ADJ22256.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobi
SCNpilot_cont_300_bf_scaffold_1578_11
R_Nitrospirae_40_19, Nitrospirae, Bacteria

Not on your lists

13032..13757
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7T7_HYPSM
peptidase C14 caspase catalytic subunit p20 Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1578_12
unknown

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13754..14365
DNA (612bp) protein (204aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1578_13
unknown

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14625..14957
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1578_14
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15060..16367
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6K4M9_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST23904.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp
major facilitator superfamily MFS_1
SCNpilot_cont_300_bf_scaffold_1578_15
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16655..17089
DNA (435bp) protein (145aa)
Tryptophan halogenase, putative n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FQ65_PELBH
Tryptophan halogenase, putative {ECO:0000313|EMBL:EAU46382.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca
tryptophan halogenase
SCNpilot_cont_300_bf_scaffold_1578_16
Phaeobacter inhibens, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17242..18300
DNA (1059bp) protein (353aa)
Putative tryptophan halogenase n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7DTD4_PHAIB
tryptophan halogenase
Putative tryptophan halogenase {ECO:0000313|EMBL:AFO92326.1}; TaxID=391619 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter
SCNpilot_cont_300_bf_scaffold_1578_17
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18325..18708
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRM3_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ22252.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
SCNpilot_cont_300_bf_scaffold_1578_18
unknown

Not on your lists

18701..18880
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1578_19
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18881..19144)
DNA (264bp) protein (88aa)
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase ZntA n=2 Tax=Oligotropha carboxidovorans RepID=F8BR34_OLICM
zntA; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase ZntA
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase ZntA {ECO:0000313|EMBL:AEI08278.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligot
SCNpilot_cont_300_bf_scaffold_1578_20
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19116..19745)
DNA (630bp) protein (210aa)
Lead, cadmium, zinc and mercury-transporting ATPase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ESY7_BRASB
lead, cadmium, zinc and mercury-transporting ATPase
Lead, cadmium, zinc and mercury-transporting ATPase {ECO:0000313|EMBL:ABQ39281.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;
Displaying 20 items

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