ggKbase home page

SCNpilot_cont_300_bf_scaffold_1593

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1593_1
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..177)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S680_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD89707.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
insertion sequence transposase protein
SCNpilot_cont_300_bf_scaffold_1593_2
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174..1094)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S679_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD89706.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1593_3
unknown

Not on your lists

1108..1203
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1593_4
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1754..2716)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FWU4_PHAMO
Uncharacterized protein {ECO:0000313|EMBL:CCG42832.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirill
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1593_5
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2931..3494
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036FFBDA
Uncharacterized protein {ECO:0000313|EMBL:KJC56492.1}; Flags: Fragment;; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source=
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1593_6
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3623..5440
DNA (1818bp) protein (606aa)
TRAG family protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07JD2_RHOP5
Conjugal transfer protein TraG {ECO:0000313|EMBL:KJC34199.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizo
conjugal transfer coupling protein TraG
SCNpilot_cont_300_bf_scaffold_1593_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5606..6049
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07JD3_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ07951.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
SCNpilot_cont_300_bf_scaffold_1593_8
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6125..7156
DNA (1032bp) protein (344aa)
Type II secretion system protein E n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20ZK9_RHOPB
Conjugal transfer protein TrbB {ECO:0000313|EMBL:KJC60354.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizo
type II secretion system protein E
SCNpilot_cont_300_bf_scaffold_1593_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7153..7683
DNA (531bp) protein (177aa)
Conjugal transfer protein TrbB n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98P51_RHILO
Conjugal transfer protein TrbC {ECO:0000313|EMBL:CEG10294.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scr
conjugal transfer protein; TrbB
SCNpilot_cont_300_bf_scaffold_1593_10
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7694..10132
DNA (2439bp) protein (813aa)
ATPase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20ZL2_RHOPB
Conjugal transfer protein TrbE {ECO:0000313|EMBL:KJC40160.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizo
conjugal transfer ATPase TrbE
SCNpilot_cont_300_bf_scaffold_1593_11
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10129..10866
DNA (738bp) protein (246aa)
P-type conjugative transfer protein TrbJ n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QNE8_9BRAD
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:EIG61304.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhi
conjugal transfer protein TrbJ
SCNpilot_cont_300_bf_scaffold_1593_12
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10904..12157
DNA (1254bp) protein (418aa)
TrbL/VirB6 plasmid conjugal transfer protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210W2_RHOPB rbh
Conjugal transfer protein TrbL {ECO:0000313|EMBL:KJC60348.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizo
conjugal transfer protein TrbL
SCNpilot_cont_300_bf_scaffold_1593_13
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12157..12840
DNA (684bp) protein (228aa)
Conjugal transfer protein trbF n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EC31_BRASB
conjugal transfer protein TrbF
Conjugal transfer protein trbF {ECO:0000313|EMBL:ABQ33725.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizob
SCNpilot_cont_300_bf_scaffold_1593_14
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12837..13784
DNA (948bp) protein (316aa)
P-type conjugative transfer protein TrbG n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QNF2_9BRAD
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:EIG61308.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="B
trbG; conjugal transfer protein TrbG
SCNpilot_cont_300_bf_scaffold_1593_15
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13781..14950
DNA (1170bp) protein (390aa)
Conjugative transfer protein TrbI n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QEX2_9BRAD rbh
Conjugal transfer protein TraI {ECO:0000313|EMBL:KJC60346.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizo
conjugation TrbI family protein
SCNpilot_cont_300_bf_scaffold_1593_16
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14961..15203
DNA (243bp) protein (81aa)
UPI0003CDDC1D related cluster n=1 Tax=unknown RepID=UPI0003CDDC1D
Uncharacterized protein {ECO:0000313|EMBL:ESX79396.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1593_17
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15200..16108)
DNA (909bp) protein (303aa)
Transcriptional regulator n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KDN8_MESAW
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGB43417.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium au
SCNpilot_cont_300_bf_scaffold_1593_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16441..17154)
DNA (714bp) protein (238aa)
transposase IS4 n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036EA2CE rbh
transposase, IS4
Transposase, IS4 family {ECO:0000313|EMBL:ABD87624.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
SCNpilot_cont_300_bf_scaffold_1593_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17650..18312)
DNA (663bp) protein (221aa)
peroxidase (EC:1.11.1.7) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
peroxidase (EC:1.11.1.7)
Peroxidase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUW2_9GAMM rbh
SCNpilot_cont_300_bf_scaffold_1593_20
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19191..19673
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NSQ8_9BRAD
Divalent cation transporter {ECO:0000313|EMBL:ETR76209.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
outer membrane efflux protein
Displaying 20 items

View Taxonomy