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SCNpilot_cont_300_bf_scaffold_1659

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1659_1
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..911)
DNA (909bp) protein (303aa)
Type I secretion membrane fusion protein, HlyD family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IWV7_METNO
HlyD family type I secretion membrane fusion protein
Type I secretion membrane fusion protein, HlyD family {ECO:0000313|EMBL:ACL62998.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacte
SCNpilot_cont_300_bf_scaffold_1659_2
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(908..2617)
DNA (1710bp) protein (570aa)
Type I secretion system ATPase n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XY84_9RHIZ rbh
Type I secretion system ATPase {ECO:0000313|EMBL:EMS39591.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylo
type I secretion system ATPase rbh
SCNpilot_cont_300_bf_scaffold_1659_3
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2833..4191
DNA (1359bp) protein (453aa)
Methyltransferase family protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YF21_9BRAD
Methyltransferase family protein {ECO:0000313|EMBL:EHR01482.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
methyltransferase type 12
SCNpilot_cont_300_bf_scaffold_1659_4
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4270..5172
DNA (903bp) protein (301aa)
Hemolysin-type calcium-binding region n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ISQ3_METNO
hemolysin-type calcium-binding protein
Hemolysin-type calcium-binding region {ECO:0000313|EMBL:ACL55830.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="
SCNpilot_cont_300_bf_scaffold_1659_5
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5178..6794
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAQ9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL49314.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
SCNpilot_cont_300_bf_scaffold_1659_6
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6905..7513
DNA (609bp) protein (203aa)
Lysophospholipase L1-like esterase n=1 Tax=Rhizobium sp. CF142 RepID=J1SMA5_9RHIZ
Lysophospholipase L1-like esterase {ECO:0000313|EMBL:EJJ26368.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobact
acyl-CoA thioesterase/lipase
SCNpilot_cont_300_bf_scaffold_1659_7
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8168..10003
DNA (1836bp) protein (612aa)
Hemolysin-type calcium-binding region n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ISQ3_METNO
hemolysin-type calcium-binding protein
Hemolysin-type calcium-binding region {ECO:0000313|EMBL:ACL55830.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="
SCNpilot_cont_300_bf_scaffold_1659_8
unknown

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comp(10599..10805)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1659_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11091..11351)
DNA (261bp) protein (87aa)
Transposase and inactivated derivatives-like protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EBC8_METSZ
Transposase {ECO:0000313|EMBL:GAN78492.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens H
transposase
SCNpilot_cont_300_bf_scaffold_1659_10

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comp(11466..12329)
DNA (864bp) protein (288aa)
ATPase AAA n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB1F9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN82615.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase of ISMdi7, IS21 family (ORF 2)
SCNpilot_cont_300_bf_scaffold_1659_11
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12326..13783)
DNA (1458bp) protein (486aa)
Transposase of ISMdi7, IS21 family (ORF 1) n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CFA9_METED rbh
transposase of ISMdi7, IS21 family (ORF 1)
Transposase of ISMdi7, IS21 family (ORF 1) {ECO:0000313|EMBL:CAX26043.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" sou
Displaying 11 items

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