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SCNpilot_cont_300_bf_scaffold_1679

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1679_1
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..520)
DNA (519bp) protein (173aa)
Conjugal transfer protein TrbL n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BTM1_XANC5
trbL; mating pair formation protein TrbL
Conjugal transfer protein TrbL {ECO:0000313|EMBL:CAJ23838.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
SCNpilot_cont_300_bf_scaffold_1679_2
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(517..792)
DNA (276bp) protein (92aa)
Possible entry/exclusion protein TrbK n=4 Tax=Pseudomonas aeruginosa RepID=Q02RQ4_PSEAB
trbK; entry/exclusion protein TrbK
Entry exclusion protein TrbK {ECO:0000313|EMBL:CAJ23837.1}; Flags: Precursor;; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" so
SCNpilot_cont_300_bf_scaffold_1679_3
Xanthomonas alfalfae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(810..1595)
DNA (786bp) protein (262aa)
Mating pair formation protein TrbJ n=4 Tax=Pseudomonas aeruginosa RepID=Q02RQ5_PSEAB rbh
trbJ; conjugal transfer protein TrbJ
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:AEO42549.1}; TaxID=981368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
SCNpilot_cont_300_bf_scaffold_1679_4
unknown

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comp(1765..1863)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1679_5
Xanthomonas alfalfae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1860..2231)
DNA (372bp) protein (124aa)
OriT-binding protein, TraJ n=4 Tax=Pseudomonas aeruginosa RepID=Q02RQ6_PSEAB
traJ; conjugal transfer relaxosome component TraJ
Uncharacterized protein {ECO:0000313|EMBL:AEO42550.1}; TaxID=981368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonop
SCNpilot_cont_300_bf_scaffold_1679_6
Xanthomonas alfalfae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2525..2812)
DNA (288bp) protein (96aa)
Possible oriT-binding protein, TraK n=4 Tax=Pseudomonas aeruginosa RepID=Q02RQ7_PSEAB
traK; oriT-binding protein, TraK
Uncharacterized protein {ECO:0000313|EMBL:AEO42551.1}; TaxID=981368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonop
SCNpilot_cont_300_bf_scaffold_1679_7
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3241..3624)
DNA (384bp) protein (128aa)
MerR from Tn4378, regulatory protein involved in Hg(II) resistance n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1L9H3_RALME
Transcriptional regulator MerR {ECO:0000313|EMBL:CQW49522.1}; TaxID=90370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonell
merR; Tn501 repressor
SCNpilot_cont_300_bf_scaffold_1679_8
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3696..4046
DNA (351bp) protein (117aa)
Mercuric transport protein MerT n=8 Tax=Proteobacteria RepID=Q02RR0_PSEAB
merT; mercuric transport protein
Mercury transporter {ECO:0000313|EMBL:EPX94456.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
SCNpilot_cont_300_bf_scaffold_1679_9
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4059..4334
DNA (276bp) protein (92aa)
Mercuric transport protein periplasmic component n=49 Tax=Bacteria RepID=A6UXG4_PSEA7
merP2; mercuric transport periplasmic protein
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P
SCNpilot_cont_300_bf_scaffold_1679_10
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4406..6091
DNA (1686bp) protein (562aa)
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=1449778 species="Bacteria; Proteobacteria; Bet
Mercuric reductase n=41 Tax=Bacteria RepID=MERA_PSEAI rbh
mercuric reductase
SCNpilot_cont_300_bf_scaffold_1679_11
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6109..6474
DNA (366bp) protein (122aa)
Mercuric resistence transcriptional repressor protein MerD n=51 Tax=Bacteria RepID=A6UXG6_PSEA7
merD; transcriptional regulator MerD
MerD from Tn4378, regulatory protein involved in Hg(II) resistance {ECO:0000313|EMBL:ABF13043.1}; MerD from Tn4380, regulatory protein involved in Hg(II) resistance {ECO:0000313|EMBL:ABF13034.1}; Puta
SCNpilot_cont_300_bf_scaffold_1679_12
Achromobacter sp. AO22, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6471..6707
DNA (237bp) protein (79aa)
Uncharacterized mercuric resistance protein MerE n=55 Tax=Bacteria RepID=MERE_PSEAI
putative mercury resistance protein
MerE {ECO:0000313|EMBL:ACH56219.1}; TaxID=554819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. AO22.;"
SCNpilot_cont_300_bf_scaffold_1679_13
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6704..7693
DNA (990bp) protein (330aa)
Uncharacterized protein n=32 Tax=Bacteria RepID=F8H2K7_PSEUT rbh
urf-2; diguanylate phosphodiesterase
Diguanylate phosphodiesterase {ECO:0000313|EMBL:EIJ47562.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspir
SCNpilot_cont_300_bf_scaffold_1679_14
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7824..8042
DNA (219bp) protein (73aa)
DNA invertase n=1 Tax=Escherichia coli RepID=UPI00037E27DC
tnpR; serine-based site-specific recombinase activity TnpR (resolvase) Tn6050 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
tnpR; serine-based site-specific recombinase activity TnpR (resolvase) Tn6050
SCNpilot_cont_300_bf_scaffold_1679_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8470..9063)
DNA (594bp) protein (198aa)
Cupin 2 conserved barrel domain protein n=4 Tax=Bacteria RepID=C6BNR7_RALP1 rbh
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADV02208.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
SCNpilot_cont_300_bf_scaffold_1679_16
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9927..10211)
DNA (285bp) protein (95aa)
Addiction module toxin, RelE/StbE family n=9 Tax=Bacteria RepID=B2UC45_RALPJ
stbE; plasmid stabilization protein ParE
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:EWS52854.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29
SCNpilot_cont_300_bf_scaffold_1679_17
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10208..10486)
DNA (279bp) protein (93aa)
Uncharacterized protein n=8 Tax=Bacteria RepID=B2UC44_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWS52853.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
SCNpilot_cont_300_bf_scaffold_1679_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10740..11318
DNA (579bp) protein (193aa)
Resolvase domain n=9 Tax=Bacteria RepID=B2UC43_RALPJ rbh
resolvase domain-containing protein
DNA-invertase {ECO:0000313|EMBL:ABR85500.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (stra
SCNpilot_cont_300_bf_scaffold_1679_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11315..14344
DNA (3030bp) protein (1010aa)
Transposase n=9 Tax=Bacteria RepID=A6VC86_PSEA7 rbh
transposase Tn3 family protein
Transposase Tn3 family protein {ECO:0000313|EMBL:ADV02204.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
SCNpilot_cont_300_bf_scaffold_1679_20
unknown

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14404..14472
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 20 items

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