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SCNpilot_cont_300_bf_scaffold_1740

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1740_1
unknown

Not on your lists

comp(1..147)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1740_2
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(153..1127)
DNA (975bp) protein (325aa)
glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=RBG_
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037D5217
glucose-1-phosphate thymidylyltransferase
SCNpilot_cont_300_bf_scaffold_1740_3
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1130..2062)
DNA (933bp) protein (311aa)
Putative glycosyl transferase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YWX5_9ACTN
Putative glycosyl transferase {ECO:0000313|EMBL:CCM62764.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
Predicted glycosyltransferases
SCNpilot_cont_300_bf_scaffold_1740_4
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2074..3246)
DNA (1173bp) protein (391aa)
Cofactor modifying protein {ECO:0000313|EMBL:KHE93320.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" sourc
hypothetical protein id=7201319 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1740_5
unknown

Not on your lists

3458..4327
DNA (870bp) protein (290aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1740_6
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

4324..5433
DNA (1110bp) protein (370aa)
Putative glycosyltransferase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZQ7_CALAS
group 1 glycosyl transferase Tax=RBG_13_Chloroflexi_56_8_curated
putative glycosyltransferase
SCNpilot_cont_300_bf_scaffold_1740_7
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(5426..6568)
DNA (1143bp) protein (381aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
Putative uncharacterized protein id=2575382 bin=GWA2_Methylomirabilis_73_35 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
SCNpilot_cont_300_bf_scaffold_1740_8
unknown

Not on your lists

6642..7424
DNA (783bp) protein (261aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1740_9
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7415..8413)
DNA (999bp) protein (333aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
Uncharacterized protein n=3 Tax=Bacteroides dorei RepID=I8W0I5_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:EIY31217.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
SCNpilot_cont_300_bf_scaffold_1740_10
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

8621..9763
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RZ35_9RHOB
hypothetical protein Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
SCNpilot_cont_300_bf_scaffold_1740_11
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9893..11389
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Desulfovibrio africanus PCS RepID=M5PRW2_DESAF
Uncharacterized protein {ECO:0000313|EMBL:EMG37127.1}; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovi
lipopolysaccharide biosynthesis protein
SCNpilot_cont_300_bf_scaffold_1740_12
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

11400..12890
DNA (1491bp) protein (497aa)
O-antigen ligase-related protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
SCNpilot_cont_300_bf_scaffold_1740_13
unknown

Not on your lists

12877..13494
DNA (618bp) protein (206aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1740_14
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13578..14477
DNA (900bp) protein (300aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Frankia sp. CN3 RepID=G6H9Q1_9ACTO
dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ADP78138.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_300_bf_scaffold_1740_15
unknown

Not on your lists

14526..14771
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1740_16
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14768..15361
DNA (594bp) protein (198aa)
Putative S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RP57_FRAAA
Methyltransferase domain {ECO:0000313|EMBL:KJE25609.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
S-adenosyl-L-methionine-dependent methyltransferase
SCNpilot_cont_300_bf_scaffold_1740_17
unknown

Not on your lists

comp(15320..15754)
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1740_18
unknown

Not on your lists

comp(15886..16548)
DNA (663bp) protein (221aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1740_19
Desulfovibrio gigas, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16545..17510)
DNA (966bp) protein (322aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GFX7_DESGI rbh
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AGW15228.1}; TaxID=1121448 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" sourc
SCNpilot_cont_300_bf_scaffold_1740_20
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

17992..18246
DNA (255bp) protein (85aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein n=1 Tax=Exiguobacterium sp. S17 RepID=S3FZP5_9BACL
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
sugar transferase
Displaying 20 items

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