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SCNpilot_cont_300_bf_scaffold_1765

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1765_1
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..649
DNA (648bp) protein (216aa)
putative type I restriction enzyme (EC:2.1.1.72)
Putative type I restriction enzyme {ECO:0000313|EMBL:CCA91250.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CCA91250.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sph
Putative type I restriction enzyme n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IGI4_9SPHN
SCNpilot_cont_300_bf_scaffold_1765_2
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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642..1961
DNA (1320bp) protein (440aa)
HsdS protein (EC:3.1.21.3)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GEP0_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA99136.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
SCNpilot_cont_300_bf_scaffold_1765_3
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1958..3196
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Vibrio splendidus RepID=UPI0003126BE4
FRG domain-containing protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
SCNpilot_cont_300_bf_scaffold_1765_4
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3193..3624
DNA (432bp) protein (144aa)
Putative type I restriction-modification system HsdR n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IGI7_9SPHN
putative type I restriction-modification system HsdR
Putative type I restriction-modification system HsdR {ECO:0000313|EMBL:CCA91253.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphing
SCNpilot_cont_300_bf_scaffold_1765_5
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3612..6284
DNA (2673bp) protein (891aa)
DEAD/DEAH box helicase n=1 Tax=Sphingobium baderi LL03 RepID=T0HNK0_9SPHN rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:EQA99138.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bade
putative type I restriction-modification system HsdR
SCNpilot_cont_300_bf_scaffold_1765_6
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6340..7206)
DNA (867bp) protein (289aa)
UPI0003CFE58D related cluster n=1 Tax=unknown RepID=UPI0003CFE58D
Nuclease {ECO:0000313|EMBL:ESZ46081.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
nuclease
SCNpilot_cont_300_bf_scaffold_1765_7
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7206..7871)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IPE0_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL62232.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
SCNpilot_cont_300_bf_scaffold_1765_8
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8352..9005)
DNA (654bp) protein (218aa)
Resolvase domain n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IEA5_XANP2
resolvase domain-containing protein
Resolvase domain {ECO:0000313|EMBL:ABS66348.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (
SCNpilot_cont_300_bf_scaffold_1765_9
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9222..9893
DNA (672bp) protein (224aa)
Uncharacterized protein {ECO:0000313|EMBL:KJV38664.1}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas s
SCNpilot_cont_300_bf_scaffold_1765_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10555..11655
DNA (1101bp) protein (367aa)
HTH-type transcriptional repressor CytR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQ54_9RHIZ
HTH-type transcriptional repressor CytR {ECO:0000313|EMBL:EYR77885.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp.
LacI family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1765_11
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11836..12798
DNA (963bp) protein (321aa)
UPI0003CE2D80 related cluster n=1 Tax=unknown RepID=UPI0003CE2D80
LacI family transcriptional regulator {ECO:0000313|EMBL:ESX78090.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
LacI family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1765_12
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12856..14328
DNA (1473bp) protein (491aa)
UPI0003CE6838 related cluster n=1 Tax=unknown RepID=UPI0003CE6838 rbh
D-ribose transporter ATP-binding protein {ECO:0000313|EMBL:KKC31734.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
ABC transporter
Displaying 12 items

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