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SCNpilot_cont_300_bf_scaffold_1898

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1898_1
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..356
DNA (354bp) protein (118aa)
MFS transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI0003774BAC
MFS family transmembrane transport protein {ECO:0000313|EMBL:EQC03217.1}; TaxID=1324960 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aero
major facilitator superfamily transporter
SCNpilot_cont_300_bf_scaffold_1898_2
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(387..788)
DNA (402bp) protein (134aa)
Endoribonuclease L-PSP n=6 Tax=Bacteria RepID=L7VQ90_9BACT
Endoribonuclease L-psp family protein {ECO:0000313|EMBL:EQC03218.1}; TaxID=1324960 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas
endoribonuclease L-PSP protein
SCNpilot_cont_300_bf_scaffold_1898_3
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(895..1344)
DNA (450bp) protein (150aa)
Uncharacterized protein n=6 Tax=Bacteria RepID=L7VVK5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EQC03219.1}; TaxID=1324960 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1898_4
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1432..2004)
DNA (573bp) protein (191aa)
Uncharacterized protein n=6 Tax=Bacteria RepID=L7VUC6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENO98313.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1898_5
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2096..3064)
DNA (969bp) protein (323aa)
Putative metal-ion transporter n=2 Tax=Aeromonas RepID=Q68E46_AERCA rbh
Magnesium transporter {ECO:0000313|EMBL:KGY62536.1}; Putative metal-ion transporter {ECO:0000313|EMBL:CAG15110.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aero
corA; Zinc transport protein zntB
SCNpilot_cont_300_bf_scaffold_1898_6
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3061..3723)
DNA (663bp) protein (221aa)
gst5; glutathione S-transferase family protein (EC:2.5.1.18)
Glutathione S-transferase family protein n=4 Tax=Proteobacteria RepID=N6Z352_9RHOO rbh
Glutathione S-transferase {ECO:0000313|EMBL:KJX28389.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae com
SCNpilot_cont_300_bf_scaffold_1898_7
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3856..4395)
DNA (540bp) protein (180aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
msrA3; putative methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=5 Tax=Proteobacteria RepID=H3LIA6_KLEOX rbh
SCNpilot_cont_300_bf_scaffold_1898_8
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4397..4840)
DNA (444bp) protein (148aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=4 Tax=Proteobacteria RepID=Q68E43_AERCA rbh
methionine sulfoxide reductase B
SCNpilot_cont_300_bf_scaffold_1898_9
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4987..5946)
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=4 Tax=Proteobacteria RepID=H3LIA4_KLEOX rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KJM84819.1}; TaxID=1619247 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1898_10
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6091..7323
DNA (1233bp) protein (411aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=T0PKH3_AERSA rbh
Osmotically inducible protein C {ECO:0000313|EMBL:KJM84820.1}; TaxID=1619247 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Ente
OsmC family protein
SCNpilot_cont_300_bf_scaffold_1898_11
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7320..7919
DNA (600bp) protein (200aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=3 Tax=Gammaproteobacteria RepID=T0PGT3_AERSA rbh
SCNpilot_cont_300_bf_scaffold_1898_12
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7922..8944
DNA (1023bp) protein (341aa)
oxidoreductase (EC:1.-.-.-)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=V3PMW8_9ENTR rbh
Oxidoreductase {ECO:0000313|EMBL:KJL63957.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" sou
SCNpilot_cont_300_bf_scaffold_1898_13
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9341..9835)
DNA (495bp) protein (165aa)
MarR family transcriptional regulator n=4 Tax=Gammaproteobacteria RepID=T0QNV0_AERSA rbh
MarR family transcriptional regulator {ECO:0000313|EMBL:EQC03229.1}; TaxID=1324960 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas
MarR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1898_14
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10586..11074
DNA (489bp) protein (163aa)
membrane protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003670B29 rbh
Integral membrane protein {ECO:0000313|EMBL:ENO98324.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1898_15
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11132..11530
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F71AB
Uncharacterized protein {ECO:0000313|EMBL:KJM84823.1}; TaxID=1619247 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter
SCNpilot_cont_300_bf_scaffold_1898_16
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11569..12528)
DNA (960bp) protein (320aa)
Integral membrane protein n=4 Tax=Proteobacteria RepID=N6Z306_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJO78129.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae compl
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1898_17
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12555..13154)
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Klebsiella oxytoca 10-5242 RepID=H3LI96_KLEOX rbh
MarR family transcriptional regulator {ECO:0000313|EMBL:ENO98276.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phen
MarR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1898_18
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13227..14189
DNA (963bp) protein (321aa)
LysR-type transcriptional regulator n=1 Tax=Aeromonas caviae RepID=Q68E32_AERCA rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KJM84825.1}; TaxID=1619247 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1898_19
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14186..14422)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Proteobacteria RepID=UPI0003647D82
Uncharacterized protein {ECO:0000313|EMBL:KJM84826.1}; TaxID=1619247 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1898_20
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14460..15509)
DNA (1050bp) protein (350aa)
Conjugal transfer protein TrbI n=1 Tax=Aeromonas caviae RepID=Q68E31_AERCA
Conjugal transfer protein TraI {ECO:0000313|EMBL:KJP31019.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloaca
trbI; conjugal transfer protein TrbI
SCNpilot_cont_300_bf_scaffold_1898_21
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15506..16555)
DNA (1050bp) protein (350aa)
Conjugal transfer protein TrbG n=1 Tax=Aeromonas caviae RepID=Q68E30_AERCA rbh
Conjugal transfer protein TrbG {ECO:0000313|EMBL:KJM84828.1}; TaxID=1619247 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enter
trbG; conjugal transfer protein TrbG
SCNpilot_cont_300_bf_scaffold_1898_22
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16552..17235)
DNA (684bp) protein (228aa)
conjugal transfer protein TrbF n=3 Tax=Proteobacteria RepID=UPI00037A7ECA rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:KEZ17848.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;"
conjugal transfer protein TrbF
SCNpilot_cont_300_bf_scaffold_1898_23
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17235..18599)
DNA (1365bp) protein (455aa)
conjugal transfer protein TrbL n=1 Tax=Hoeflea sp. 108 RepID=UPI00037834B4 rbh
Conjugal transfer protein TrbL {ECO:0000313|EMBL:KEZ17847.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
trbL; conjugal transfer protein TrbL
SCNpilot_cont_300_bf_scaffold_1898_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18604..18993)
DNA (390bp) protein (130aa)
conjugal transfer protein TrbK n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D2348
Conjugal transfer protein TrbK {ECO:0000313|EMBL:KIZ34767.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudo
trbK; conjugal transfer protein TrbK
SCNpilot_cont_300_bf_scaffold_1898_25
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19004..19774)
DNA (771bp) protein (257aa)
conjugal transfer protein TrbJ n=1 Tax=Hoeflea sp. 108 RepID=UPI00036FDECC rbh
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:KEQ52091.1}; Flags: Precursor;; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;"
conjugal transfer protein TrbJ
SCNpilot_cont_300_bf_scaffold_1898_26
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19771..22149)
DNA (2379bp) protein (793aa)
Conjugal transfer ATPase TrbE n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W888_9SPHN
Conjugal transfer ATPase TrbE {ECO:0000313|EMBL:ENY79948.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingop
conjugal transfer ATPase TrbE
SCNpilot_cont_300_bf_scaffold_1898_27
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22162..22443)
DNA (282bp) protein (94aa)
conjugal transfer protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E9F98
Conjugal transfer protein {ECO:0000313|EMBL:KHJ55164.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamiren
conjugal transfer protein TrbB
SCNpilot_cont_300_bf_scaffold_1898_28
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22443..22775)
DNA (333bp) protein (111aa)
Conjugal transfer protein TrbC n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQK9_9SPHN
Conjugal transfer protein TrbC {ECO:0000313|EMBL:EJU15027.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
conjugal transfer protein TrbC
SCNpilot_cont_300_bf_scaffold_1898_29
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22772..23242)
DNA (471bp) protein (157aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Sphingomonas sp. LH128 RepID=J8W5P2_9SPHN
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:EJU15026.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=
P-type conjugative transfer ATPase TrbB
Displaying 29 items

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