ggKbase home page

SCNpilot_cont_300_bf_scaffold_702

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_702_1
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83..418
DNA (336bp) protein (112aa)
nucleotidyltransferase n=1 Tax=Rhizobium mongolense RepID=UPI0003B6A2E6
nucleotidyltransferase HEPN domain-containing protein
Nucleotidyltransferase HEPN domain-containing protein {ECO:0000313|EMBL:AJD42397.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobact
SCNpilot_cont_300_bf_scaffold_702_2
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1103..1975)
DNA (873bp) protein (291aa)
Putative phenol degradation enzyme n=1 Tax=Celeribacter baekdonensis B30 RepID=K2K0X8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEZ05706.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
putative phenol degradation enzyme
SCNpilot_cont_300_bf_scaffold_702_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2075..2848)
DNA (774bp) protein (258aa)
Putative levodione reductase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z8U5_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig178, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47941.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
putative levodione reductase
SCNpilot_cont_300_bf_scaffold_702_4
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2841..4037)
DNA (1197bp) protein (399aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Thiolase, N-terminal domain protein n=2 Tax=delta proteobacterium NaphS2 RepID=D8EYP6_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS39134.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium
SCNpilot_cont_300_bf_scaffold_702_5
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4034..4480)
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS39135.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium
SCNpilot_cont_300_bf_scaffold_702_6
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4477..6036)
DNA (1560bp) protein (520aa)
AMP-binding enzyme n=1 Tax=delta proteobacterium NaphS2 RepID=D8EYP4_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS39137.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium
ligase
SCNpilot_cont_300_bf_scaffold_702_7
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6061..8115)
DNA (2055bp) protein (685aa)
Hydantoinase B/oxoprolinase n=1 Tax=delta proteobacterium NaphS2 RepID=D8EYP3_9DELT rbh
Hydantoinase B/oxoprolinase {ECO:0000313|EMBL:EFK11360.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
hydantoinase B/oxoprolinase
SCNpilot_cont_300_bf_scaffold_702_8
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8169..10301)
DNA (2133bp) protein (711aa)
5-oxoprolinase; K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
5-oxoprolinase (EC:3.5.2.9)
Hydantoinase/oxoprolinase n=1 Tax=delta proteobacterium NaphS2 RepID=D8EYP2_9DELT rbh
SCNpilot_cont_300_bf_scaffold_702_9
unknown

Not on your lists

comp(10329..11135)
DNA (807bp) protein (269aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_702_10
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11132..11476)
DNA (345bp) protein (115aa)
Acetone carboxylase gamma subunit n=1 Tax=delta proteobacterium NaphS2 RepID=D8F0D0_9DELT
Acetone carboxylase gamma subunit {ECO:0000313|EMBL:EFK10777.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
acetone carboxylase gamma subunit
SCNpilot_cont_300_bf_scaffold_702_11
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11473..13452)
DNA (1980bp) protein (660aa)
Putative bacteriochlorophyll 4-vinyl reductase n=1 Tax=delta proteobacterium NaphS2 RepID=D8F0D1_9DELT rbh
Putative bacteriochlorophyll 4-vinyl reductase {ECO:0000313|EMBL:EFK10714.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
apc1; subunit of acetophenone carboxylase
SCNpilot_cont_300_bf_scaffold_702_12
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13523..14134)
DNA (612bp) protein (204aa)
Transcriptional regulator, TetR family n=1 Tax=delta proteobacterium NaphS2 RepID=D8F0D2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KJS40804.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium
transcriptional regulator, tetR family protein
SCNpilot_cont_300_bf_scaffold_702_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14486..15841)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=2 Tax=Brucella abortus RepID=N7UX78_BRUAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR79285.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cytosine/purines, uracil, thiamine, allantoin transporter permease rbh
SCNpilot_cont_300_bf_scaffold_702_14
Brucella sp. F5/99, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15896..17977)
DNA (2082bp) protein (694aa)
5-oxoprolinase n=6 Tax=Brucella RepID=C9U1J0_BRUPB rbh
5-oxoprolinase {ECO:0000313|EMBL:EEY24694.1}; TaxID=437701 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. F5/99.;"
5-oxoprolinase
SCNpilot_cont_300_bf_scaffold_702_15
Brucella ceti, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17990..19750)
DNA (1761bp) protein (587aa)
Uncharacterized protein n=4 Tax=Brucella RepID=N7QNF3_9RHIZ rbh
Hydantoinase B/oxoprolinase family protein {ECO:0000313|EMBL:EEH13885.1}; TaxID=595497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella c
hydantoinase B/oxoprolinase
SCNpilot_cont_300_bf_scaffold_702_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19993..20961
DNA (969bp) protein (323aa)
Transcriptional activator NphR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMQ7_9RHIZ
Transcriptional activator NphR {ECO:0000313|EMBL:EYR79282.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_702_17
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21268..22215)
DNA (948bp) protein (316aa)
Transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BDP8_RHILV
Transcriptional regulator {ECO:0000313|EMBL:EJC64055.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sou
putative transcriptional regulator, LysR family
SCNpilot_cont_300_bf_scaffold_702_18
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22368..23549
DNA (1182bp) protein (394aa)
Muconate/chloromuconate cycloisomerase n=2 Tax=Rhizobium leguminosarum RepID=J0USQ8_RHILV
Muconate/chloromuconate cycloisomerase {ECO:0000313|EMBL:EJC64056.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
putative muconate lactonizing enzyme
SCNpilot_cont_300_bf_scaffold_702_19
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23560..23850
DNA (291bp) protein (97aa)
Muconolactone Delta-isomerase {ECO:0000256|PIRNR:PIRNR001486}; Short=MIase {ECO:0000256|PIRNR:PIRNR001486};; EC=5.3.3.4 {ECO:0000256|PIRNR:PIRNR001486};; TaxID=1408224 species="Bacteria; Proteobacteri
Muconolactone Delta-isomerase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A4D3_RHIFH
hypothetical protein
SCNpilot_cont_300_bf_scaffold_702_20
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23903..24841
DNA (939bp) protein (313aa)
catA; catechol 1,2-dioxygenase (EC:1.13.11.1)
Catechol 1,2-dioxygenase {ECO:0000313|EMBL:AFL53968.1}; EC=1.13.11.1 {ECO:0000313|EMBL:AFL53968.1};; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Si
catechol 1,2-dioxygenase n=1 Tax=Rhizobium leguminosarum RepID=UPI00035E2E5F
SCNpilot_cont_300_bf_scaffold_702_21
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24947..26305
DNA (1359bp) protein (453aa)
Benzoate 1,2-dioxygenase alpha subunit n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A4D5_RHIFH
Benzene 1,2-dioxygenase {ECO:0000313|EMBL:KDP71773.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="E
Benzoate 1,2-dioxygenase alpha subunit
SCNpilot_cont_300_bf_scaffold_702_22
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26302..26790
DNA (489bp) protein (163aa)
2-chlorobenzoate 1,2-dioxygenase {ECO:0000313|EMBL:ABL69283.1}; EC=1.14.12.13 {ECO:0000313|EMBL:ABL69283.1};; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhod
2-chlorobenzoate 1,2-dioxygenase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B189_PARDP
2-chlorobenzoate 1,2-dioxygenase
SCNpilot_cont_300_bf_scaffold_702_23
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26829..26999
DNA (171bp) protein (57aa)
Electron transfer component of benzoate 1,2-dioxygenase n=1 Tax=Burkholderia gladioli RepID=Q3C2D2_BURGA
2Fe-2S iron-sulfur cluster binding domain protein
Electron transfer component of benzoate 1,2-dioxygenase {ECO:0000313|EMBL:BAE46755.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderi
Displaying 23 items

View Taxonomy