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SCNpilot_cont_300_bf_scaffold_2002

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2002_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..329)
DNA (327bp) protein (109aa)
ABC transporter n=1 Tax=Humibacter albus RepID=UPI0003B4516E
ABC transporter {ECO:0000313|EMBL:KHK97216.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
ABC transporter
SCNpilot_cont_300_bf_scaffold_2002_2
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(326..625)
DNA (300bp) protein (100aa)
MarR family transcriptional regulator n=1 Tax=Humibacter albus RepID=UPI0003B31173
Uncharacterized protein {ECO:0000313|EMBL:KHK97241.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SCNpilot_cont_300_bf_scaffold_2002_3
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1088..1264)
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Serinicoccus profundi RepID=UPI000255E59E
Uncharacterized protein {ECO:0000313|EMBL:CCI53441.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2002_4
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1342..2994
DNA (1653bp) protein (551aa)
Putative NADH oxidase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CM13_CLAM3
CoA-disulfide reductase {ECO:0000313|EMBL:KHK99817.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
putative NADH oxidase
SCNpilot_cont_300_bf_scaffold_2002_5
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3018..3434
DNA (417bp) protein (139aa)
Putative CTP pyrophosphohydrolase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R370_LEIAQ
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KHK96641.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
nudix hydrolase
SCNpilot_cont_300_bf_scaffold_2002_6
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3444..4157
DNA (714bp) protein (238aa)
Dehydrogenase {ECO:0000313|EMBL:KHK96443.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
short-chain dehydrogenase/reductase SDR id=7721794 bin=CNBR_ACT species=Kineococcus radiotolerans genus=Kineococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_2002_7
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4421..5596)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B44398 rbh
Phage-related integrase (Modular protein) {ECO:0000313|EMBL:CDK01657.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
phage-related integrase
SCNpilot_cont_300_bf_scaffold_2002_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5553..5810)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KPA2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CDK01656.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
SCNpilot_cont_300_bf_scaffold_2002_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5828..6457)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000362347E
Uncharacterized protein {ECO:0000313|EMBL:CDK01646.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
SCNpilot_cont_300_bf_scaffold_2002_10
unknown

Not on your lists

comp(6987..7787)
DNA (801bp) protein (267aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2002_11
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7866..10631)
DNA (2766bp) protein (922aa)
hypothetical protein n=1 Tax=Acaricomes phytoseiuli RepID=UPI00037E830A
Uncharacterized protein {ECO:0000313|EMBL:CCQ18366.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AW25M09.;"
hemolysin activation/secretion protein
SCNpilot_cont_300_bf_scaffold_2002_12
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10832..11188
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4V791_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EDX23828.1}; TaxID=465541 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
XRE family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2002_13
Gordonia araii, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11185..11541)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Gordonia araii NBRC 100433 RepID=G7GZ37_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB08862.1}; TaxID=1073574 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia araii NBRC 100433.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2002_14
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12090..13316
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037D78B7
Uncharacterized protein {ECO:0000313|EMBL:KHK98845.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hydrolase
SCNpilot_cont_300_bf_scaffold_2002_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13292..15133
DNA (1842bp) protein (614aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F90D45
Uncharacterized protein {ECO:0000313|EMBL:CDK00260.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
trwC; Conjugative relaxase TrwC
SCNpilot_cont_300_bf_scaffold_2002_16
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15739..16389
DNA (651bp) protein (217aa)
acyl-CoA hydrolase, partial n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B434CA
Acyl-CoA esterase {ECO:0000313|EMBL:KJL39549.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2002_17
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16386..16571
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KHK95070.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SCNpilot_cont_300_bf_scaffold_2002_18
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16578..17423)
DNA (846bp) protein (282aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EWT07313.1}; EC=1.1.1.157 {ECO:0000313|EMBL:EWT07313.1};; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intras
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
hypothetical protein n=1 Tax=Rhodococcus rhodochrous RepID=UPI00030A5250 rbh
SCNpilot_cont_300_bf_scaffold_2002_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17517..17810
DNA (294bp) protein (98aa)
antibiotic biosynthesis monooxygenase n=1 Tax=Curvibacter lanceolatus RepID=UPI0003601F55
putative antibiotic biosynthesis monooxygenase
Putative antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AGU47797.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source
SCNpilot_cont_300_bf_scaffold_2002_20
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17889..19730
DNA (1842bp) protein (614aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00037C7A09
Two component GAF domain sensor and regulator
Two component GAF domain sensor and regulator {ECO:0000313|EMBL:CCG02392.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococ
SCNpilot_cont_300_bf_scaffold_2002_21
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19854..21080
DNA (1227bp) protein (409aa)
monooxygenase FAD-binding protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000372DBBA rbh
2,6-dihydroxypyridine hydroxylase
2,6-dihydroxypyridine hydroxylase {ECO:0000313|EMBL:AIJ23844.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanol
SCNpilot_cont_300_bf_scaffold_2002_22
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

21113..22150
DNA (1038bp) protein (346aa)
Alcohol dehydrogenase GroES-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARJ5_RUBXD
alcohol dehydrogenase GroES-like protein
Alcohol dehydrogenase GroES-like protein {ECO:0000313|EMBL:ABG05983.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.
SCNpilot_cont_300_bf_scaffold_2002_23
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22140..22574
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628513
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ23845.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
SCNpilot_cont_300_bf_scaffold_2002_24
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22700..24250
DNA (1551bp) protein (517aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gordonia soli NBRC 108243 RepID=M0QG39_9ACTO rbh
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAC67404.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108
ABC transporter family protein
SCNpilot_cont_300_bf_scaffold_2002_25
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24247..25269
DNA (1023bp) protein (341aa)
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IW03_9BURK
Sugar ABC transporter permease {ECO:0000313|EMBL:KDR37939.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia
sugar ABC transporter permease
SCNpilot_cont_300_bf_scaffold_2002_26
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25269..26030
DNA (762bp) protein (254aa)
sugar ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B3DF33
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAC67402.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243
branched-chain amino acid transport system / permease component family protein
SCNpilot_cont_300_bf_scaffold_2002_27
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26027..26290
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Rhodococcus sp. 29MFTsu3.1 RepID=UPI00036F908F
Sugar ABC transporter permease {ECO:0000313|EMBL:KDR37938.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia
sugar ABC transporter permease
SCNpilot_cont_300_bf_scaffold_2002_28
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26437..27609
DNA (1173bp) protein (391aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B41A91
Uncharacterized protein {ECO:0000313|EMBL:GAC67401.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
sugar ABC transporter periplasmic ligand binding protein
SCNpilot_cont_300_bf_scaffold_2002_29
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

27680..28588
DNA (909bp) protein (303aa)
Ethyl tert-butyl ether degradation EthD n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZGV0_ANACC
Ethyl tert-butyl ether degradation EthD
Ethyl tert-butyl ether degradation EthD {ECO:0000313|EMBL:AFZ57772.1}; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC 2789
SCNpilot_cont_300_bf_scaffold_2002_30
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

28681..29649
DNA (969bp) protein (323aa)
luciferase-like protein id=14424570 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
luciferase-like protein Tax=CSP1_2_Dadabacteria
hypothetical protein
Displaying items 1-30 of 35 in total

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