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SCNpilot_cont_300_bf_scaffold_2138

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2138_1
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..1924)
DNA (1923bp) protein (641aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVW0_ACCPU
conjugal transfer relaxase TraI
Uncharacterized protein {ECO:0000313|EMBL:ACV37770.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).
SCNpilot_cont_300_bf_scaffold_2138_2
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1945..2304)
DNA (360bp) protein (120aa)
TraJ n=2 Tax=Xylella fastidiosa RepID=L7SUI9_XYLFS
conjugal transfer relaxosome component TraJ
Uncharacterized protein {ECO:0000313|EMBL:ACV37769.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).
SCNpilot_cont_300_bf_scaffold_2138_3
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2554..2892
DNA (339bp) protein (113aa)
TraK n=1 Tax=Legionella pneumophila subsp. pneumophila RepID=I7I1M1_LEGPN
Uncharacterized protein {ECO:0000313|EMBL:EXI72054.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
traK; protein TraK
SCNpilot_cont_300_bf_scaffold_2138_4
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2889..3620
DNA (732bp) protein (244aa)
DNA processing protein n=1 Tax=uncultured bacterium RepID=Q8RSG6_9BACT
Conjugal transfer protein TraL {ECO:0000313|EMBL:KGR62628.1}; TaxID=56459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
conjugal transfer protein TraL
SCNpilot_cont_300_bf_scaffold_2138_5
Variovorax sp. DB1, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3617..4066
DNA (450bp) protein (150aa)
Protein TraM n=16 Tax=Bacteria RepID=TRAM5_ECOLX
conjugal transfer protein TraM
Uncharacterized protein {ECO:0000313|EMBL:AFK33089.1}; TaxID=1179817 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. DB1.;"
SCNpilot_cont_300_bf_scaffold_2138_6
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4074..4427)
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=I3RYN2_RALPI
Uncharacterized protein {ECO:0000313|EMBL:AFK33119.1}; TaxID=329 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (Bur
conjugal transfer protein TraO
SCNpilot_cont_300_bf_scaffold_2138_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4444..5379)
DNA (936bp) protein (312aa)
Transcriptional repressor protein KorB n=4 Tax=root RepID=KORB2_ECOLX
KorB partitioning and repressor protein {ECO:0000313|EMBL:CAK12743.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2138_8
unknown

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5544..5738
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2138_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6578..7606)
DNA (1029bp) protein (343aa)
plasmid encoded RepA protein id=12553825 bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria rbh
Plasmid replication protein RepA {ECO:0000313|EMBL:GAO22503.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
plasmid encoded RepA protein
SCNpilot_cont_300_bf_scaffold_2138_10
Oceanimonas sp. GK1, Oceanimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7757..7990)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Oceanimonas sp. (strain GK1) RepID=H2G1Y9_OCESG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY02972.1}; TaxID=511062 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Oceanimonas.;" source="Oceanimonas sp. (strai
SCNpilot_cont_300_bf_scaffold_2138_11
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7987..8616)
DNA (630bp) protein (210aa)
ParA n=1 Tax=Singularimonas variicoloris RepID=UPI000370F3FB rbh
ATPases involved in chromosome partitioning
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:KHS05475.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xantho
SCNpilot_cont_300_bf_scaffold_2138_12
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9303..10283
DNA (981bp) protein (327aa)
conjugal transfer protein TrbB n=1 Tax=Methylomicrobium buryatense RepID=UPI00034C7B30
Putative conjugal transfer protein, ATPase TrbB {ECO:0000313|EMBL:CCE25740.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium
conjugal transfer ATPase TrbB
SCNpilot_cont_300_bf_scaffold_2138_13
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10286..10684
DNA (399bp) protein (133aa)
Mating pair formation protein TrbC n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NWM5_AROAE
trbC; conjugal transfer protein TrbC
Mating pair formation protein TrbC {ECO:0000313|EMBL:CAI10539.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum a
SCNpilot_cont_300_bf_scaffold_2138_14
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10671..10982
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RW42_ACCPU
Conjugal transfer protein TrbD {ECO:0000313|EMBL:EXI72020.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK
conjugal transfer protein TrbD
SCNpilot_cont_300_bf_scaffold_2138_15

Not on your lists

10979..13558
DNA (2580bp) protein (860aa)
TrbE mating pair formation protein n=3 Tax=Bacteria RepID=D4N5H3_9BACT
TrbE mating pair formation protein {ECO:0000313|EMBL:ADD63277.1}; TaxID=743682 species="Bacteria; environmental samples.;" source="uncultured bacterium pAKD4.;"
conjugal transfer protein TrbE
SCNpilot_cont_300_bf_scaffold_2138_16
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13555..14292
DNA (738bp) protein (246aa)
TrbF mating pair formation protein n=2 Tax=Bacteria RepID=D4N5H4_9BACT
Conjugal transfer protein TrbF {ECO:0000313|EMBL:EXI84247.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA
conjugal transfer protein TrbF
SCNpilot_cont_300_bf_scaffold_2138_17

Not on your lists

14304..15215
DNA (912bp) protein (304aa)
Trbg protein n=2 Tax=root RepID=F2Q659_9BACT
Trbg protein {ECO:0000313|EMBL:ABO36550.1}; TaxID=429581 species="Bacteria; environmental samples.;" source="uncultured bacterium pMCBF6.;"
P-type conjugative transfer protein TrbG
SCNpilot_cont_300_bf_scaffold_2138_18

Not on your lists

15311..15835
DNA (525bp) protein (175aa)
TrbH protein n=4 Tax=root RepID=Q0E6D9_PSEAI
Conjugal transfer protein {ECO:0000313|EMBL:ADU90886.1}; Conjugal transfer protein TrbH {ECO:0000313|EMBL:ADU90720.1}; Mating pair formation protein {ECO:0000313|EMBL:AFR44046.1}; TrbH protein {ECO:00
conjugal transfer protein TrbH
SCNpilot_cont_300_bf_scaffold_2138_19
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15832..17139
DNA (1308bp) protein (436aa)
conjugal transfer protein TrbI n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023750FD
Type IV secretion system protein virB10 {ECO:0000313|EMBL:EXI84244.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibact
trbI; TrbI mating pair formation protein
SCNpilot_cont_300_bf_scaffold_2138_20
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17132..17908
DNA (777bp) protein (259aa)
conjugal transfer protein TrbJ n=1 Tax=Paracoccus sp. N5 RepID=UPI000361DF7F
conjugal transfer protein TrbJ
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:AHB06153.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pno
SCNpilot_cont_300_bf_scaffold_2138_21
unknown

Not on your lists

17918..18124
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2138_22

Not on your lists

18128..18436
DNA (309bp) protein (103aa)
Mating pair formation protein n=1 Tax=uncultured bacterium RepID=J9S0B4_9BACT
Mating pair formation protein {ECO:0000313|EMBL:AFR43989.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
TrbL/VirB6 plasmid conjugal transfer protein
SCNpilot_cont_300_bf_scaffold_2138_23
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18576..19370
DNA (795bp) protein (265aa)
Type IV secretory pathway n=1 Tax=Xylella fastidiosa EB92.1 RepID=F7ND92_XYLFS
conjugal transfer protein
Conjugal transfer protein {ECO:0000313|EMBL:AIC13645.1}; TaxID=1401256 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa
SCNpilot_cont_300_bf_scaffold_2138_24

Not on your lists

19383..19823
DNA (441bp) protein (147aa)
TrbN n=1 Tax=Sphingomonas sp. A1 RepID=Q4AC42_9SPHN
transglycosylase SLT domain-containing protein 6
TrbN {ECO:0000313|EMBL:AEV57132.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 24 items

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