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SCNpilot_cont_300_bf_scaffold_2464

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2464_1
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1355)
DNA (1353bp) protein (451aa)
gdh; quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Probable glucose dehydrogenase (Pyrroloquinoline-quinone) protein {ECO:0000313|EMBL:CAC45553.1}; EC=1.1.5.2 {ECO:0000313|EMBL:CAC45553.1};; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteob
Quinoprotein glucose dehydrogenase n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P3R6_RHIML
SCNpilot_cont_300_bf_scaffold_2464_2
unknown

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comp(1385..1522)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2464_3
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1649..2182)
DNA (534bp) protein (178aa)
Phospholipase n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0G4J1_RHIML
Phospholipase {ECO:0000313|EMBL:EHK75787.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sino
SCNpilot_cont_300_bf_scaffold_2464_4
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2371..3357
DNA (987bp) protein (329aa)
pyruvate oxidase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030C453B
Pyruvate oxidase {ECO:0000313|EMBL:ESW91871.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC26
thiamine pyrophosphate protein domain-containing protein
SCNpilot_cont_300_bf_scaffold_2464_5
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3422..4246)
DNA (825bp) protein (275aa)
Catalase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QHV8_9RHIZ rbh
Catalase {ECO:0000313|EMBL:EKF60701.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobac
catalase rbh
SCNpilot_cont_300_bf_scaffold_2464_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4527..7529
DNA (3003bp) protein (1001aa)
Sensory box protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WTV7_9SPHN
DNA, contig: SP617 {ECO:0000313|EMBL:GAN13393.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
sensor histidine kinase
SCNpilot_cont_300_bf_scaffold_2464_7
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7522..7893
DNA (372bp) protein (124aa)
Response regulator receiver protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DDI2_9RHIZ
Response regulator receiver protein {ECO:0000313|EMBL:EJT00966.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
response regulator receiver protein
SCNpilot_cont_300_bf_scaffold_2464_8
unknown

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7983..8159
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2464_9
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8156..8746
DNA (591bp) protein (197aa)
Response regulator receiver protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ENB6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KDP73152.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="E
response regulator receiver protein
SCNpilot_cont_300_bf_scaffold_2464_10
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8755..9375
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037522AA rbh
Nicotinamidase-like amidase {ECO:0000313|EMBL:EIM28347.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga loton
isochorismatase hydrolase
SCNpilot_cont_300_bf_scaffold_2464_11
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9462..10256
DNA (795bp) protein (265aa)
3-oxoacyl-(Acyl-carrier protein) reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBZ1_PELHB rbh
3-oxoacyl-ACP reductase
3-oxoacyl-(Acyl-carrier protein) reductase {ECO:0000313|EMBL:AEQ51639.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" sourc
SCNpilot_cont_300_bf_scaffold_2464_12
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10662..11465
DNA (804bp) protein (268aa)
Putative periplasmic binding ABC transporter n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XB23_RHIFR
periplasmic binding ABC transporter
Putative periplasmic binding ABC transporter {ECO:0000313|EMBL:AFL53079.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group
SCNpilot_cont_300_bf_scaffold_2464_13
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11465..12403
DNA (939bp) protein (313aa)
PREDICTED: probable sulfate transport system permease protein cysT-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C11FEC
ABC transporter permease protein {ECO:0000313|EMBL:CDP50316.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB
binding-protein-dependent transport system inner membrane protein
SCNpilot_cont_300_bf_scaffold_2464_14
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12400..13185
DNA (786bp) protein (262aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HND7_9RHIZ
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KKB08419.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="De
ABC transporter permease
SCNpilot_cont_300_bf_scaffold_2464_15
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13197..14273
DNA (1077bp) protein (359aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomic
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036B2D21
spermidine/putrescine ABC transporter ATPase
SCNpilot_cont_300_bf_scaffold_2464_16
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14304..15290)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036C1F12
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:AHF83261.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="R
Displaying 16 items

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