ggKbase home page

SCNpilot_cont_300_bf_scaffold_2509

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2509_1
Asticcacaulis sp. YBE204, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..94
DNA (93bp) protein (31aa)
Transposase IS4 {ECO:0000313|EMBL:ESQ80667.1}; TaxID=1282363 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. YBE20
SCNpilot_cont_300_bf_scaffold_2509_2
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177..605
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IP81_9SPHN
Transposase {ECO:0000313|EMBL:EZP65385.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (P
transposase
SCNpilot_cont_300_bf_scaffold_2509_3
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

665..934
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI0003752CD6
Transposase {ECO:0000313|EMBL:EZP64485.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (P
Conserved Putative membrane protein
SCNpilot_cont_300_bf_scaffold_2509_4
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1034..1891)
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XYG7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGY01691.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirill
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2509_5
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2146..2445)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IJ77_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11780.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2509_6
unknown

Not on your lists

2784..2906
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2509_7
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3015..3614
DNA (600bp) protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:KJV42327.1}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas s
SCNpilot_cont_300_bf_scaffold_2509_8
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3709..5748)
DNA (2040bp) protein (680aa)
Putative transcriptional regulator n=1 Tax=Sphingobium sp. AP49 RepID=J2KWJ1_9SPHN rbh
Putative transcriptional regulator {ECO:0000313|EMBL:EJK79496.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphi
nuclease
SCNpilot_cont_300_bf_scaffold_2509_9
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6210..6479
DNA (270bp) protein (90aa)
CopG family transcripitonal regulator n=2 Tax=Sphingobium RepID=T0GXB1_9SPHN
CopG family transcripitonal regulator {ECO:0000313|EMBL:EQB08606.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
CopG family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2509_10
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6428..6769
DNA (342bp) protein (114aa)
Plasmid stabilization protein n=3 Tax=Sphingobium RepID=T0H6G6_9SPHN
Plasmid stabilization protein {ECO:0000313|EMBL:KEQ51845.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
plasmid stabilization system protein
SCNpilot_cont_300_bf_scaffold_2509_11
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6897..7145
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S369_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50455.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_cont_300_bf_scaffold_2509_12
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7164..8861
DNA (1698bp) protein (566aa)
Resolvase domain-containing protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S3Y3_9SPHN rbh
Resolvase domain-containing protein {ECO:0000313|EMBL:AGH50456.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sph
resolvase domain-containing protein
Displaying 12 items

View Taxonomy