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SCNpilot_cont_300_bf_scaffold_4557

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4557_1
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..311
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036F43A1
GntR family transcriptional regulator {ECO:0000313|EMBL:KKC33519.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psy
putative GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_4557_2
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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319..1524
DNA (1206bp) protein (402aa)
dehydratase n=1 Tax=Kaistia granuli RepID=UPI0003808FA2 rbh
Dehydratase {ECO:0000313|EMBL:KKC33484.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
mandelate racemase / muconate lactonizing enzyme family protein
SCNpilot_cont_300_bf_scaffold_4557_3
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1550..2527
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036CE7AA rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKC33483.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4557_4
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2606..3589
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000365A0A4 rbh
ABC transporter permease {ECO:0000313|EMBL:KKC33482.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
putative ribose ABC transporter
SCNpilot_cont_300_bf_scaffold_4557_5
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3586..4344
DNA (759bp) protein (253aa)
ABC transporter ATP-binding protein n=1 Tax=Kaistia granuli RepID=UPI000362A10D rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKC33481.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psych
ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_4557_6
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4355..5062
DNA (708bp) protein (236aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003825F60 rbh
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KKC33480.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
SCNpilot_cont_300_bf_scaffold_4557_7
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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5571..5843
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037FA27B
Gluconolactonase {ECO:0000313|EMBL:KIF42809.1}; Flags: Fragment;; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141
regucalcin-like protein
SCNpilot_cont_300_bf_scaffold_4557_8
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5988..7601)
DNA (1614bp) protein (538aa)
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:ABS66278.1}; EC=1.1.1.31 {ECO:0000313|EMBL:ABS66278.1};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobac
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000370A5C4 rbh
3-hydroxyisobutyrate dehydrogenase
SCNpilot_cont_300_bf_scaffold_4557_9
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7834..9102
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003770A6A rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM28968.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononid
YgbK-like hypothetical protein
SCNpilot_cont_300_bf_scaffold_4557_10
Halomonas sp. S2151, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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9084..9746
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003772167 rbh
Aldolase {ECO:0000313|EMBL:KJZ18400.1}; TaxID=579478 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. S2151.;"
class II aldolase/adducin family protein
SCNpilot_cont_300_bf_scaffold_4557_11
unknown

Not on your lists

9884..10018
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4557_12
Kaistia granuli, Kaistia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10135..10305)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037A1E03
SCNpilot_cont_300_bf_scaffold_4557_13
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10366..12219)
DNA (1854bp) protein (618aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037A1E03 rbh
hypothetical protein
Tagatose-bisphosphate aldolase noncatalytic subunit {ECO:0000313|EMBL:ABP72456.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;
SCNpilot_cont_300_bf_scaffold_4557_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12461..13630)
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000378B13B rbh
transcription regulator protein
Transcription regulator protein {ECO:0000313|EMBL:ACM31372.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacter
Displaying 14 items

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