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SCNpilot_cont_300_bf_scaffold_4876

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4876_1
Acetobacter orientalis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..276)
DNA (276bp) protein (92aa)
Transcriptional regulator n=1 Tax=Gluconobacter oxydans H24 RepID=K7SSL3_GLUOY
Transcriptional regulator MarR/HxlR {ECO:0000313|EMBL:GAN65989.1}; TaxID=1231341 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acet
putative HTH-type transcriptional regulator yybR
SCNpilot_cont_300_bf_scaffold_4876_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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429..1448
DNA (1020bp) protein (340aa)
Zinc-binding alcohol dehydrogenase family protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QB16_RHOPT
zinc-binding alcohol dehydrogenase
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:ACF02139.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;
SCNpilot_cont_300_bf_scaffold_4876_3
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1453..2538)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00038096C9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ70447.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wi
SCNpilot_cont_300_bf_scaffold_4876_4
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2496..3728)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI00030FC70C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ70448.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wi
SCNpilot_cont_300_bf_scaffold_4876_5
unknown

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comp(3838..3999)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4876_6
unknown

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comp(4027..4182)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4876_7
unknown

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comp(4201..4359)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4876_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4487..6784)
DNA (2298bp) protein (766aa)
5-oxoprolinase n=1 Tax=Kaistia granuli RepID=UPI00037A043E
Hydantoinase/oxoprolinase domain family protein
Hydantoinase/oxoprolinase domain family protein {ECO:0000313|EMBL:ADZ69747.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LM
SCNpilot_cont_300_bf_scaffold_4876_9
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6781..8082)
DNA (1302bp) protein (434aa)
N-methylhydantoinase A/acetone carboxylase, beta subunit (EC:3.5.2.14 3.5.2.9)
5-oxoprolinase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F412C
5-oxoprolinase {ECO:0000313|EMBL:ESW86423.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B
SCNpilot_cont_300_bf_scaffold_4876_10
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8284..9330
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X8I6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ45865.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. ME
SCNpilot_cont_300_bf_scaffold_4876_11
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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9634..10158
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003652D86
DnaJ domain-containing protein
DnaJ domain protein {ECO:0000313|EMBL:ADZ69760.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL0
SCNpilot_cont_300_bf_scaffold_4876_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10222..10914
DNA (693bp) protein (231aa)
N-acetylmuramoyl-L-alanine amidase AmiD {ECO:0000313|EMBL:EYR77736.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EYR77736.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rh
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D2F8C
SCNpilot_cont_300_bf_scaffold_4876_13
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11022..11534
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003793728
lytic transglycosylase
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ADZ69762.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC
Displaying 13 items

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