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SCNpilot_cont_300_bf_scaffold_4933

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4933_1
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..448
DNA (447bp) protein (149aa)
transcriptional regulator n=1 Tax=Kaistia granuli RepID=UPI00037D02A2
Probable transcriptional regulatory protein JL39_09620 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agr
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4933_2
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

583..1119
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TIX6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE06414.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4933_3
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1211..1720
DNA (510bp) protein (170aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000369BDAF rbh
ruvC; crossover junction endodeoxyribonuclease RuvC
SCNpilot_cont_300_bf_scaffold_4933_4
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1795..2412
DNA (618bp) protein (206aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction DNA helicase RuvA n=1 Tax=Kaistia granuli RepID=UPI000368DB7B rbh
ruvA; Holliday junction DNA helicase RuvA
SCNpilot_cont_300_bf_scaffold_4933_5
Kaistia granuli, Kaistia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2441..2911
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003714086
SCNpilot_cont_300_bf_scaffold_4933_6
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2908..3942
DNA (1035bp) protein (345aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteri
Holliday junction DNA helicase RuvB n=1 Tax=Kaistia granuli RepID=UPI00037F72E2 rbh
ruvB; Holliday junction DNA helicase subunit RuvB
SCNpilot_cont_300_bf_scaffold_4933_7
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4018..4485
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000360620C
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:ESR26178.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum bara
4-hydroxybenzoyl-CoA thioesterase
SCNpilot_cont_300_bf_scaffold_4933_8
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4715..5425
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003611FE7 rbh
tolQ; tolQ protein
TolQ Protein {ECO:0000313|EMBL:BAC52420.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens
SCNpilot_cont_300_bf_scaffold_4933_9
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5556..5843
DNA (288bp) protein (96aa)
biopolymer transporter ExbD n=1 Tax=Kaistia granuli RepID=UPI0003622E75
biopolymer transport TolR
Biopolymer transport TolR {ECO:0000313|EMBL:ABS13933.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (
SCNpilot_cont_300_bf_scaffold_4933_10
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5847..6839
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036BFA08 rbh
Putative TolA {ECO:0000313|EMBL:EAS50760.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium
TolA, TolA protein
SCNpilot_cont_300_bf_scaffold_4933_11
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6922..8082
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036B7056
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenz
translocation protein TolB
SCNpilot_cont_300_bf_scaffold_4933_12
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8508..9020
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000375EC2A rbh
outer membrane lipoprotein
Outer membrane lipoprotein {ECO:0000313|EMBL:AEI05549.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carbox
SCNpilot_cont_300_bf_scaffold_4933_13
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9744..10088
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A79F1
Tol-pal system protein {ECO:0000313|EMBL:EZQ17567.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzane
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4933_14
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10039..11415
DNA (1377bp) protein (459aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035DD261 rbh
ATPase
SCNpilot_cont_300_bf_scaffold_4933_15
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11553..11774
DNA (222bp) protein (74aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
ATP-dependent metalloprotease FtsH (EC:3.6.4.6)
cell division protein FtsH n=1 Tax=Kaistia granuli RepID=UPI000361C637
SCNpilot_cont_300_bf_scaffold_4933_16
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11785..13419
DNA (1635bp) protein (545aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
cell division protein FtsH n=1 Tax=Kaistia granuli RepID=UPI000361C637
cell division protein FtsH
SCNpilot_cont_300_bf_scaffold_4933_17
Photorhabdus asymbiotica, Photorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13501..13911)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037102E9
hypothetical protein
Similar to isochorismatase {ECO:0000313|EMBL:CAR67351.1}; Uncharacterized protein {ECO:0000313|EMBL:CAQ82885.1}; TaxID=553480 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Displaying 17 items

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