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SCNpilot_cont_300_bf_scaffold_14811

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_14811_1
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..885)
DNA (885bp) protein (295aa)
QoxA, quinol oxidase subunit I n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039F33F6
Cytochrome B561 {ECO:0000313|EMBL:KGF69042.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
cytochrome C oxidase subunit I
SCNpilot_cont_300_bf_scaffold_14811_2
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(882..1448)
DNA (567bp) protein (189aa)
Cytochrome c oxidase, subunit II n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDV2_9CAUL
Cytochrome B561 {ECO:0000313|EMBL:KGF69043.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
cytochrome C oxidase subunit II
SCNpilot_cont_300_bf_scaffold_14811_3
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1578..2117
DNA (540bp) protein (180aa)
membrane protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A0C288
Membrane protein {ECO:0000313|EMBL:KGF69070.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_14811_4
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2090..2644)
DNA (555bp) protein (185aa)
membrane protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A116C2
Membrane protein {ECO:0000313|EMBL:KGF69044.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_14811_5
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2825..3226)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A292_STAND
Uncharacterized protein {ECO:0000313|EMBL:ADH89555.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Stark
hypothetical protein
SCNpilot_cont_300_bf_scaffold_14811_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3422..3757)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000370D348
Uncharacterized protein {ECO:0000313|EMBL:CDP51377.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_14811_7
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3883..4200)
DNA (318bp) protein (106aa)
Putative araC-like transcription regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F7T4_SORC5
AraC family transcriptional regulator {ECO:0000313|EMBL:KJS19403.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea s
araC-like transcription regulator
SCNpilot_cont_300_bf_scaffold_14811_8
unknown

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4395..4850
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_14811_9
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5110..5571
DNA (462bp) protein (154aa)
AraC family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00037962A7
Dehydrogenase {ECO:0000313|EMBL:KJS19402.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
short-chain dehydrogenase
SCNpilot_cont_300_bf_scaffold_14811_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5718..5969)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4PY84_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KAJ36772.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agroba
hypothetical protein
SCNpilot_cont_300_bf_scaffold_14811_11

Not on your lists

6054..6449
DNA (396bp) protein (132aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO04080.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_300_bf_scaffold_14811_12
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6446..6718
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4KD92_THASP
Uncharacterized protein {ECO:0000313|EMBL:ACR02503.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_14811_13
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6823..7086
DNA (264bp) protein (88aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthob
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Coproporphyrinogen-III oxidase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7M2_STAND
Displaying 13 items

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