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SCNpilot_cont_300_bf_scaffold_17276

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_17276_1
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..377
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000361B383
Uncharacterized protein {ECO:0000313|EMBL:EAV43409.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata
hypothetical protein
SCNpilot_cont_300_bf_scaffold_17276_2
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(378..932)
DNA (555bp) protein (185aa)
molybdopterin biosynthesis protein B n=1 Tax=Kaistia granuli RepID=UPI0003785904 rbh
molybdenum cofactor biosynthesis protein MoaB
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 2
SCNpilot_cont_300_bf_scaffold_17276_3
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(998..1918)
DNA (921bp) protein (307aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003669B1D rbh
SCNpilot_cont_300_bf_scaffold_17276_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1915..3840)
DNA (1926bp) protein (642aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000364A165 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41230.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
TPR repeat-containing protein
SCNpilot_cont_300_bf_scaffold_17276_5
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3984..4517)
DNA (534bp) protein (178aa)
ispB; octaprenyl-diphosphate synthase (EC:2.5.1.-)
Octaprenyl-diphosphate synthase {ECO:0000313|EMBL:CDM56662.1}; EC=2.5.1.- {ECO:0000313|EMBL:CDM56662.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003762BA0
SCNpilot_cont_300_bf_scaffold_17276_6
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5102..5332
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000371B0A1
Uncharacterized protein {ECO:0000313|EMBL:KJF71474.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_17276_7
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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5725..6102
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036804E0
small domain family methyltransferase
Methyltransferase small domain family {ECO:0000313|EMBL:ADZ70035.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 /
SCNpilot_cont_300_bf_scaffold_17276_8
unknown

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6131..6244
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_17276_9
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6241..6915
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000366B164 rbh
Periplasmic serine protease (ClpP class) {ECO:0000313|EMBL:EDQ32093.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea
protease SohB-like
SCNpilot_cont_300_bf_scaffold_17276_10
Kaistia granuli, Kaistia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6984..7172
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000377E646
SCNpilot_cont_300_bf_scaffold_17276_11
Kaistia granuli, Kaistia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7194..7589)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003761BC7
SCNpilot_cont_300_bf_scaffold_17276_12
unknown

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comp(7809..8285)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_17276_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8537..10444)
DNA (1908bp) protein (636aa)
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetas
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000379CA36 rbh
Displaying 13 items

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