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SCNpilot_cont_300_bf_scaffold_2443_3

Organism: SCNpilot_cont_300_bf_UNK

megabin RP 54 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 19
Location: 1858..2433

Top 3 Functional Annotations

Value Algorithm Source
probable RNA polymerase sigma factor Y n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C59D8 similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 190.0
  • Bit_score: 295
  • Evalue 3.70e-77
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EMI26786.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 38.7
  • Coverage: 191.0
  • Bit_score: 125
  • Evalue 9.20e-26
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 191.0
  • Bit_score: 121
  • Evalue 3.50e-25

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Taxonomy

Rhodopirellula europaea → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 576
ATGCACACGACCTCCACCACGCTGCTGGCGCGGGTGCGCGAGCTCGGCGACGCGGACGCGTGGGGGCGGTTCGTACGCGTGTACTCGCCCCTCCTCTACAGCTGGGCGCGGCAGATGGGGCTTCGGCACGAGGACGCCGTAGACCTCGTCCAGGACGTGTTCGCCGTCCTCGTCCAGAAGCTCCCCACCTTCGACTACGACACGCACGGGCGGTTCCGCGGCTGGCTGTGGACCGTCACCCGGCGCCGCTGGGTGGAGCGGCGTCGGCGGGCCAGGCTCCCGCTCGACCCGGCCCGCGACCCGGCCGAACTGCCCGACGCGGACGACCCGCCCGACACCGGCGTGGGTGTCGAGGAGGCCGAGTTCCGGGCTCATCTGCTGCGGAACGTCCTGCCGACGCTCCGCGGCAACTTCCACGCCTCGACCTGGCAGGCGTTCTGGAAGCACGTCGTGGAGGGCCGCCCGGCCGCCGCCGTCGCGGCCGAGGAGGGGGTGTCGGTCGCGGCGGTGTACAAGGCCAAGCTGCGGGTGACCGCTCACCTGTCGAGGGAGCTCGGCGACCTGCTGAACCGCTAG
PROTEIN sequence
Length: 192
MHTTSTTLLARVRELGDADAWGRFVRVYSPLLYSWARQMGLRHEDAVDLVQDVFAVLVQKLPTFDYDTHGRFRGWLWTVTRRRWVERRRRARLPLDPARDPAELPDADDPPDTGVGVEEAEFRAHLLRNVLPTLRGNFHASTWQAFWKHVVEGRPAAAVAAEEGVSVAAVYKAKLRVTAHLSRELGDLLNR*