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SCNpilot_cont_300_bf_scaffold_2443

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2443_1
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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3..389
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00035C731B
transcriptional regulator
Transcriptional regulators-like protein {ECO:0000313|EMBL:ADB19320.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellu
SCNpilot_cont_300_bf_scaffold_2443_2
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(364..1692)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000307D885 rbh
hypothetical protein Tax=RBG_16_Planctomycetes_64_10_curated
membrane protein
SCNpilot_cont_300_bf_scaffold_2443_3
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1858..2433
DNA (576bp) protein (192aa)
probable RNA polymerase sigma factor Y n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C59D8
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EMI26786.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" s
sigma-70 family RNA polymerase sigma factor
SCNpilot_cont_300_bf_scaffold_2443_4
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2436..4427
DNA (1992bp) protein (664aa)
serine/threonine protein kinase with PASTA sensor(s) (EC:2.7.11.25); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=GWF2_Verrucomicrobia_62_7_curated
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D73806 rbh
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2443_5
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

4548..5429
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C59D5
Uncharacterized protein {ECO:0000313|EMBL:EDL57620.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2443_6
unknown

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5442..5834
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2443_7
unknown

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comp(6083..6802)
DNA (720bp) protein (240aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2443_8
Choristoneura rosaceana alphabaculovirus, Alphabaculovirus, Viruses

Not on your lists

comp(6886..7155)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Choristoneura rosaceana alphabaculovirus RepID=S5N410_9ABAC
Uncharacterized protein {ECO:0000313|EMBL:AGR57100.1}; TaxID=1367205 species="Viruses; dsDNA viruses, no RNA stage; Baculoviridae; Alphabaculovirus; unclassified Alphabaculovirus.;" source="Choristone
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2443_9
unknown

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comp(7185..7883)
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2443_10
unknown

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comp(7918..9708)
DNA (1791bp) protein (597aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2443_11
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9906..10604)
DNA (699bp) protein (233aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVK0_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM60822.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
SCNpilot_cont_300_bf_scaffold_2443_12
unknown

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comp(10677..11387)
DNA (711bp) protein (237aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2443_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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11715..13241
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D814_SINAD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25549.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
SCNpilot_cont_300_bf_scaffold_2443_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13238..14506
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9K5_SINAD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25550.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
Displaying 14 items

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