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SCNpilot_cont_300_bf_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 214 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_68_1
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..167
DNA (165bp) protein (55aa)
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
2-nitropropane dioxygenase, NPD n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSM1_SPHAL
2-nitropropane dioxygenase
SCNpilot_cont_300_bf_scaffold_68_2
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

231..2300
DNA (2070bp) protein (690aa)
alcohol dehydrogenase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036367EE rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KFD29413.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoiku
alcohol dehydrogenase (acceptor)
SCNpilot_cont_300_bf_scaffold_68_3
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2398..3120
DNA (723bp) protein (241aa)
Transcriptional regulator n=1 Tax=Sphingobium sp. AP49 RepID=J2WQ23_9SPHN rbh
Transcriptional regulator {ECO:0000313|EMBL:EJK85078.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium s
regulatory protein TetR
SCNpilot_cont_300_bf_scaffold_68_4
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3239..4042
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D1Y4_SPHYA rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU72992.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
enoyl-CoA hydratase/isomerase
SCNpilot_cont_300_bf_scaffold_68_5
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4047..4688
DNA (642bp) protein (214aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EY08_SPHCR rbh
flavin reductase domain-containing protein
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:AEG48290.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium
SCNpilot_cont_300_bf_scaffold_68_6
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4850..7249
DNA (2400bp) protein (800aa)
formyl-CoA transferase (EC:2.8.3.16)
formyl-CoA transferase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000372C7F7 rbh
Formyl-CoA transferase {ECO:0000313|EMBL:AJR25183.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Y
SCNpilot_cont_300_bf_scaffold_68_7
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7277..8281
DNA (1005bp) protein (335aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase n=1 Tax=Sphingobium sp. AP49 RepID=J2D5T0_9SPHN rbh
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:KEZ18496.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomo
luciferase-like protein
SCNpilot_cont_300_bf_scaffold_68_8
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8294..8935
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EY11_SPHCR rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG48293.1}; Flags: Precursor;; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sourc
SCNpilot_cont_300_bf_scaffold_68_9
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8938..10404
DNA (1467bp) protein (489aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
carboxylesterase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B49C38
carboxylesterase type B
SCNpilot_cont_300_bf_scaffold_68_10
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10401..10814)
DNA (414bp) protein (138aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Sphingobium sp. AP49 RepID=J2WS74_9SPHN
Putative nucleic-acid-binding protein containing a Zn-ribbon {ECO:0000313|EMBL:EJK85070.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
hypothetical protein
SCNpilot_cont_300_bf_scaffold_68_11
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10818..11969)
DNA (1152bp) protein (384aa)
thiolase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C298 rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KEZ18491.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
thiolase
SCNpilot_cont_300_bf_scaffold_68_12
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11966..14038)
DNA (2073bp) protein (691aa)
3-hydroxybutyryl-CoA epimerase (EC:5.1.2.3)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C299 rbh
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KEZ18490.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
SCNpilot_cont_300_bf_scaffold_68_13
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14025..16082)
DNA (2058bp) protein (686aa)
PQQ-dependent dehydrogenase, methanol/ethanol family n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EYD3_SPHCR rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:AJR25189.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YB
PQQ-dependent dehydrogenase methanol/ethanol family protein
SCNpilot_cont_300_bf_scaffold_68_14
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16088..17626)
DNA (1539bp) protein (513aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
acyl-CoA ligase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C29B rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU73003.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
SCNpilot_cont_300_bf_scaffold_68_15
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17663..18979)
DNA (1317bp) protein (439aa)
Arabinose efflux permease family protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WS70_9SPHN rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:KEZ18487.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="
major facilitator superfamily protein
SCNpilot_cont_300_bf_scaffold_68_16
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18996..20225)
DNA (1230bp) protein (410aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D630_SPHYA rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KEZ18486.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoik
SCNpilot_cont_300_bf_scaffold_68_17
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20256..20990)
DNA (735bp) protein (245aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036E642B rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU73006.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
SCNpilot_cont_300_bf_scaffold_68_18
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21008..22030)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D1Z8_SPHYA rbh
Putative aminoglycoside phosphotransferase {ECO:0000313|EMBL:KEZ18484.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source
aminoglycoside phosphotransferase
SCNpilot_cont_300_bf_scaffold_68_19
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22126..22842
DNA (717bp) protein (239aa)
Transcriptional regulator n=1 Tax=Sphingobium sp. AP49 RepID=J2LC95_9SPHN
TetR family transcriptional regulator {ECO:0000313|EMBL:AJR25194.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
regulatory protein TetR
SCNpilot_cont_300_bf_scaffold_68_20
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22860..25250
DNA (2391bp) protein (797aa)
FO synthase subunit 1 n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EYE0_SPHCR rbh
FO synthase subunit 1 {ECO:0000313|EMBL:KEQ52269.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorop
FO synthase subunit 1
SCNpilot_cont_300_bf_scaffold_68_21
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25240..25899
DNA (660bp) protein (220aa)
NADPH-dependent F420 reductase n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D631_SPHYA rbh
NADPH-dependent F420 reductase {ECO:0000313|EMBL:EKU73010.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
NADPH-dependent F420 reductase
SCNpilot_cont_300_bf_scaffold_68_22
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25906..26673
DNA (768bp) protein (256aa)
coenzyme F420-0 gamma-glutamyl ligase (EC:6.3.2.-)
Gamma-glutamyl ligase n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CQ34_SPHYA rbh
Gamma-glutamyl ligase {ECO:0000313|EMBL:KEZ18480.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoiku
SCNpilot_cont_300_bf_scaffold_68_23
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26670..27599
DNA (930bp) protein (310aa)
2-phospho-L-lactate transferase (EC:2.7.1.-)
LPPG:FO 2-phospho-L-lactate transferase n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D202_SPHYA rbh
LPPG:FO 2-phospho-L-lactate transferase {ECO:0000313|EMBL:EKU73012.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="
SCNpilot_cont_300_bf_scaffold_68_24
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27604..28188
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000361CE8B
2-phospho-L-lactate guanylyltransferase {ECO:0000313|EMBL:KFD29390.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="S
hypothetical protein
SCNpilot_cont_300_bf_scaffold_68_25
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28263..29435
DNA (1173bp) protein (391aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Sphingobium sp. AP49 RepID=J2WQ08_9SPHN rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EJK85058.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
SCNpilot_cont_300_bf_scaffold_68_26
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29686..31356)
DNA (1671bp) protein (557aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C17E34 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KFD29388.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoik
SCNpilot_cont_300_bf_scaffold_68_27
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31353..32216)
DNA (864bp) protein (288aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EU61_SPHCR rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:AJR24969.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2
enoyl-CoA hydratase/isomerase
SCNpilot_cont_300_bf_scaffold_68_28
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32231..33013)
DNA (783bp) protein (261aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase (EC:1.1.1.178)
Uncharacterized protein n=2 Tax=Sphingobium RepID=J2WRZ0_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU73017.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
SCNpilot_cont_300_bf_scaffold_68_29
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33025..34257)
DNA (1233bp) protein (411aa)
formyl-CoA transferase (EC:2.8.3.16)
CoA transferase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C2AA rbh
CoA-transferase {ECO:0000313|EMBL:AJR24971.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
SCNpilot_cont_300_bf_scaffold_68_30
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34512..35378
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D637_SPHYA rbh
Permease {ECO:0000313|EMBL:KFD29383.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingom
hypothetical protein
Displaying items 1-30 of 214 in total

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