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SCNpilot_cont_300_bf_scaffold_439

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_439_1
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50..334
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HHL3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB12527.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
hypothetical protein
SCNpilot_cont_300_bf_scaffold_439_2
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

331..732
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GYE0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KKC23874.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
SCNpilot_cont_300_bf_scaffold_439_3
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

892..2757
DNA (1866bp) protein (622aa)
chromosome partitioning protein ParB n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262B6AB rbh
ParB-like protein {ECO:0000313|EMBL:KEQ53286.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chloropheno
ParB-like protein
SCNpilot_cont_300_bf_scaffold_439_4
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2876..3340
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037C61F4
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_cont_300_bf_scaffold_439_5
unknown

Not on your lists

3333..3446
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_439_6
Exiguobacterium sp. S17, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3600..4109
DNA (510bp) protein (170aa)
ROS/MUCR transcriptional regulator family protein n=1 Tax=Exiguobacterium sp. S17 RepID=S3FIF2_9BACL
ROS/MUCR transcriptional regulator family protein {ECO:0000313|EMBL:EPE62010.1}; TaxID=856854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_439_7
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4112..4333)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T256_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:BAR54380.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium di
hypothetical protein
SCNpilot_cont_300_bf_scaffold_439_8
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4333..5961)
DNA (1629bp) protein (543aa)
Transposase IS66 n=2 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0H915_9SPHN rbh
Transposase IS66 {ECO:0000313|EMBL:EQB09522.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium li
transposase IS66
SCNpilot_cont_300_bf_scaffold_439_9
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6060..6407)
DNA (348bp) protein (116aa)
transposase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAD2A
Scaffold41, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29948.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
IS66 Orf2 like
SCNpilot_cont_300_bf_scaffold_439_10
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6404..6751)
DNA (348bp) protein (116aa)
transposase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAD3A
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:EZP67727.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sph
transposase
SCNpilot_cont_300_bf_scaffold_439_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6901..7461
DNA (561bp) protein (187aa)
Glycogen synthase n=1 Tax=Collinsella sp. CAG:398 RepID=R7ACK4_9ACTN
hypothetical protein
Histone {ECO:0000313|EMBL:AIJ48966.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
SCNpilot_cont_300_bf_scaffold_439_12
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8248..8568
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D578_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:KFL46105.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_439_13
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8766..9035
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z5D3_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:AHE55584.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_439_14
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9004..9648
DNA (645bp) protein (215aa)
Conjugal transfer protein TraF n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z5D2_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:AHE55585.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
traF; conjugal transfer protein TraF
SCNpilot_cont_300_bf_scaffold_439_15
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9636..10334
DNA (699bp) protein (233aa)
Putative lytic transglycosylase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGJ8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE55586.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
putative lytic transglycosylase
SCNpilot_cont_300_bf_scaffold_439_16
unknown

Not on your lists

10331..10690
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_439_17
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10677..12686
DNA (2010bp) protein (670aa)
Conjugal transfer protein TraI n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJS9_9SPHN
Conjugal transfer protein TraI {ECO:0000313|EMBL:KEQ53278.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
conjugal transfer protein TraI
SCNpilot_cont_300_bf_scaffold_439_18
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13033..14307)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003728C8F rbh
Uncharacterized protein {ECO:0000313|EMBL:CCW16480.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
putative glycosyltransferase
SCNpilot_cont_300_bf_scaffold_439_19
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14309..14833)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003806BD1
Uncharacterized protein {ECO:0000313|EMBL:CCW16481.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
hypothetical protein
SCNpilot_cont_300_bf_scaffold_439_20
unknown

Not on your lists

comp(15074..15421)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_439_21
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15987..17921
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQV6_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_439_22
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17951..18712)
DNA (762bp) protein (254aa)
DNA polymerase III epsilon subunit and related 3'-5' exonuclease n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCK1_9SPHN rbh
DNA polymerase III epsilon subunit and related 3'-5' exonuclease {ECO:0000313|EMBL:EAT08889.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
exonuclease
SCNpilot_cont_300_bf_scaffold_439_23
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19014..19931
DNA (918bp) protein (306aa)
Putative nucleotidyltransferase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z5C5_SPHJU
Putative nucleotidyltransferase {ECO:0000313|EMBL:KEQ53265.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
DNA-binding protein
SCNpilot_cont_300_bf_scaffold_439_24
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20096..22117
DNA (2022bp) protein (674aa)
conjugal transfer protein TraG n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B1ED
Conjugal transfer protein TraG {ECO:0000313|EMBL:KEQ53264.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
traG; conjugal transfer protein TraG
SCNpilot_cont_300_bf_scaffold_439_25
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22114..22545
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJS3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE55605.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
SCNpilot_cont_300_bf_scaffold_439_26
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22542..23582
DNA (1041bp) protein (347aa)
Conjugal transfer protein TrbB n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJS2_9SPHN
conjugal transfer protein TrbB
Conjugal transfer protein TrbB {ECO:0000313|EMBL:BAK67280.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi
SCNpilot_cont_300_bf_scaffold_439_27
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23579..23914
DNA (336bp) protein (112aa)
conjugal transfer protein TrbC n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000366C078
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
conjugal transfer protein TrbC
SCNpilot_cont_300_bf_scaffold_439_28
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23911..24183
DNA (273bp) protein (91aa)
UPI0003D00E3E related cluster n=1 Tax=unknown RepID=UPI0003D00E3E
Conjugal transfer protein TrbD {ECO:0000313|EMBL:KEZ21108.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
conjugal transfer protein TrbD
SCNpilot_cont_300_bf_scaffold_439_29
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24177..26621
DNA (2445bp) protein (815aa)
conjugal transfer protein TrbE n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037D4A75
conjugal transfer protein TrbE
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_cont_300_bf_scaffold_439_30
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26663..27439
DNA (777bp) protein (259aa)
Conjugal transfer protein TrbJ n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH66_9SPHN
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:ENY82796.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingo
conjugal transfer protein TrbJ
Displaying items 1-30 of 56 in total

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