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SCNpilot_cont_300_bf_scaffold_52

Search features with annotation key words

Displaying items 1-30 of 244 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_52_1
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

203..892
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B6CA2B
YD repeat-containing protein
YD repeat-containing protein {ECO:0000313|EMBL:AIE87468.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas g
SCNpilot_cont_300_bf_scaffold_52_2
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

1190..2350
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00035D9D12
YD repeat-containing protein
YD repeat-containing protein {ECO:0000313|EMBL:AIE87468.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas g
SCNpilot_cont_300_bf_scaffold_52_3
unknown

Not on your lists

2332..2676
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_52_4
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

2928..3599
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B6CA2B
YD repeat-containing protein
YD repeat-containing protein {ECO:0000313|EMBL:AIE87468.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas g
SCNpilot_cont_300_bf_scaffold_52_5
unknown

Not on your lists

3603..3902
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_52_6
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

3990..4607
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B6CA2B
RHS repeat-associated core domain
RHS repeat-associated core domain {ECO:0000313|EMBL:CCW34014.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthon
SCNpilot_cont_300_bf_scaffold_52_7
unknown

Not on your lists

4585..4953
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_52_8
unknown

Not on your lists

5067..5243
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_52_9
unknown

Not on your lists

5230..5553
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_52_10
unknown

Not on your lists

5891..6217
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_52_11
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

6269..6952
DNA (684bp) protein (228aa)
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
SCNpilot_cont_300_bf_scaffold_52_12
unknown

Not on your lists

7002..7565
DNA (564bp) protein (188aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_52_13
unknown

Not on your lists

7877..8242
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_52_14
unknown

Not on your lists

8699..8857
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_52_15
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

8854..9240
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EZP1_SORC5
transcriptional repressor, CopY family
Transcriptional repressor, CopY family {ECO:0000313|EMBL:AIE84316.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimb
SCNpilot_cont_300_bf_scaffold_52_16
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

9237..10676
DNA (1440bp) protein (480aa)
TonB family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X37_SOLUE
TonB family protein
TonB family protein {ECO:0000313|EMBL:AIE84315.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengiso
SCNpilot_cont_300_bf_scaffold_52_17
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

10998..14024
DNA (3027bp) protein (1009aa)
Glycoside hydrolase family 29 (Alpha-L-fucosidase) n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EXQ9_EMTOG rbh
putative glycosyl hydrolase
Putative glycosyl hydrolase {ECO:0000313|EMBL:AIE85994.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas gi
SCNpilot_cont_300_bf_scaffold_52_18
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(14122..15072)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003682591
oxidoreductase domain protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AIE85304.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas
SCNpilot_cont_300_bf_scaffold_52_19
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(15133..18132)
DNA (3000bp) protein (1000aa)
Predicted ATPase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EW08_9BACT
transcriptional activator
Transcriptional activator {ECO:0000313|EMBL:AIE85562.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas gins
SCNpilot_cont_300_bf_scaffold_52_20
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

18256..19593
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00037FA57D
sugar ABC transporter sugar-binding protein
Sugar ABC transporter sugar-binding protein {ECO:0000313|EMBL:AIE85303.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source=
SCNpilot_cont_300_bf_scaffold_52_21
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19599..19826
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEG4_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27764.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
SCNpilot_cont_300_bf_scaffold_52_22
unknown

Not on your lists

19774..20133
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_52_23
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20133..21764
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI00037A3FAA rbh
Prabable sialidase {ECO:0000313|EMBL:EDL59408.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
glycosyl hydrolase family protein
SCNpilot_cont_300_bf_scaffold_52_24
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

21784..22317
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B3B2E7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE85133.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
SCNpilot_cont_300_bf_scaffold_52_25
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

22353..25424
DNA (3072bp) protein (1024aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI0003706746 rbh
hypothetical protein Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_52_26
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

25641..26702
DNA (1062bp) protein (354aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fi
Putative histidine kinase n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RDJ6_9RHOO
sensor histidine kinase
SCNpilot_cont_300_bf_scaffold_52_27
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

26748..27959
DNA (1212bp) protein (404aa)
Signal peptide protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XA41_9BACT rbh
Signal peptide protein {ECO:0000313|EMBL:EEF63382.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphae
hypothetical protein-signal peptide and transmembrane prediction
SCNpilot_cont_300_bf_scaffold_52_28
unknown

Not on your lists

28536..28799
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_52_29
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(28879..29226)
DNA (348bp) protein (116aa)
Transcriptional regulator, HxlR family n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U797_9CYAN
MarR family transcriptional regulator {ECO:0000313|EMBL:KIF21283.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
HxlR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_52_30
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

29316..30326
DNA (1011bp) protein (337aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U5C1_9CYAN rbh
alcohol dehydrogenase
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:AFY90277.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis
Displaying items 1-30 of 244 in total

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