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SCNpilot_cont_300_bf_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 453 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_9_1
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)
elongation factor Tu n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DB07F6
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacte
translation elongation factor Tu (EF-TU)
SCNpilot_cont_300_bf_scaffold_9_2
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

267..1490
DNA (1224bp) protein (408aa)
Beta-lactamase n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QC17_RHOPT rbh
beta-lactamase
Uncharacterized protein {ECO:0000313|EMBL:KGJ70996.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium dia
SCNpilot_cont_300_bf_scaffold_9_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1513..1878
DNA (366bp) protein (122aa)
Glutathione-dependent formaldehyde-activating, GFA n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J7M1_NOSP7
Aldehyde-activating protein {ECO:0000313|EMBL:ETR77343.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
glutathione-dependent formaldehyde-activating protein
SCNpilot_cont_300_bf_scaffold_9_4
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2161..2580
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXQ8_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC21489.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (s
SCNpilot_cont_300_bf_scaffold_9_5
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2666..3715
DNA (1050bp) protein (350aa)
NMT1/THI5-like family protein 1 n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F002_9BURK rbh
NMT1/THI5-like protein {ECO:0000313|EMBL:KCV60127.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchisept
ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_9_6
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3809..4612
DNA (804bp) protein (268aa)
ABC transporter, ATP-binding protein n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KTL8_BORA1 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGE01740.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achrom
ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_9_7
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4612..5481
DNA (870bp) protein (290aa)
Putative type IV conjugative transfer system protein TraL n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X5M4_9BURK rbh
Putative type IV conjugative transfer system protein TraL {ECO:0000313|EMBL:EFF77985.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobac
ABC transporter, permease component
SCNpilot_cont_300_bf_scaffold_9_8
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5628..6584)
DNA (957bp) protein (319aa)
Transcriptional regulatory protein LysR family n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GG14_9BRAD
transcriptional regulatory protein LysR family
Transcriptional regulatory protein LysR family {ECO:0000313|EMBL:BAL79701.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sou
SCNpilot_cont_300_bf_scaffold_9_9
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6771..7538)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PHG5_9BRAD rbh
short-chain dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:KGT75650.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japo
SCNpilot_cont_300_bf_scaffold_9_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7610..8353)
DNA (744bp) protein (248aa)
Phosphoglycerate mutase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q211B7_RHOPB rbh
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ABD89019.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
SCNpilot_cont_300_bf_scaffold_9_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8522..9307
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAG2_9BRAD rbh
Oxidoreductase {ECO:0000313|EMBL:KIZ47263.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.
short-chain dehydrogenase/reductase SDR family protein
SCNpilot_cont_300_bf_scaffold_9_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9327..10301)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003683BF2 rbh
Bradyrhizobium elkanii strain UASWS1015 Contig169, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50563.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
SCNpilot_cont_300_bf_scaffold_9_13
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10401..11462)
DNA (1062bp) protein (354aa)
Bll5454 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89J30_BRADU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ71006.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium dia
SCNpilot_cont_300_bf_scaffold_9_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11511..12746)
DNA (1236bp) protein (412aa)
Acyl-CoA dehydrogenase-like n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q134Q4_RHOPS rbh
acyl-CoA dehydrogenase-like protein
Acyl-CoA dehydrogenase-like {ECO:0000313|EMBL:ABE40435.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudom
SCNpilot_cont_300_bf_scaffold_9_15
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12985..13680
DNA (696bp) protein (232aa)
Transcriptional regulatory protein TetR family n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G5M3_9BRAD rbh
transcriptional regulatory protein TetR family
Transcriptional regulatory protein TetR family {ECO:0000313|EMBL:BAL76060.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sou
SCNpilot_cont_300_bf_scaffold_9_16
unknown

Not on your lists

13749..13958
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_9_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14151..14390)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJ34_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63763.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_cont_300_bf_scaffold_9_18
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14772..15014)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037556E4
Uncharacterized protein {ECO:0000313|EMBL:KGJ70207.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium dia
hypothetical protein
SCNpilot_cont_300_bf_scaffold_9_19
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15240..16736
DNA (1497bp) protein (499aa)
Aldehyde dehydrogenase (NAD+) n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IFE3_9BRAD rbh
Bradyrhizobium elkanii strain UASWS1015 Contig174, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49290.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
aldehyde dehydrogenase
SCNpilot_cont_300_bf_scaffold_9_20
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17218..17841
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YW01_BRASO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCD87954.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
SCNpilot_cont_300_bf_scaffold_9_21
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18262..19089
DNA (828bp) protein (276aa)
RNA methyltransferase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037C0F96 rbh
RNA methyltransferase
RNA methyltransferase TrmH, group 3 {ECO:0000313|EMBL:ABD89176.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhod
SCNpilot_cont_300_bf_scaffold_9_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19189..19617)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKF4_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63293.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_cont_300_bf_scaffold_9_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19649..20110)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000367BD14
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD88644.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc
SCNpilot_cont_300_bf_scaffold_9_24
unknown

Not on your lists

20282..20599
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_9_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20936..21169
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFW6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KIZ47422.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
SCNpilot_cont_300_bf_scaffold_9_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21263..21973)
DNA (711bp) protein (237aa)
OmpA-like transmembrane region n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMR4_NITHX
OmpA-like transmembrane region
OmpA-like transmembrane region {ECO:0000313|EMBL:ABE62483.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" sou
SCNpilot_cont_300_bf_scaffold_9_27
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22246..23436
DNA (1191bp) protein (397aa)
beta-lactamase n=1 Tax=Afipia birgiae RepID=UPI0002F0E8BE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36095.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
beta-lactamase
SCNpilot_cont_300_bf_scaffold_9_28
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23441..23917)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PBR7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39016.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
tryptophan-rich sensory protein
SCNpilot_cont_300_bf_scaffold_9_29
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24054..24305)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IQZ0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35945.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
SCNpilot_cont_300_bf_scaffold_9_30
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24595..25152
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D8B984
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43384.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
Displaying items 1-30 of 453 in total

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