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SCNpilot_cont_300_bf_scaffold_33

Search features with annotation key words

Displaying items 1-30 of 434 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_33_1
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..127
DNA (126bp) protein (42aa)
(2Fe-2S)-binding protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A8F93A
Vanillate demethylase oxygenase subunit
(2Fe-2S)-binding protein {ECO:0000313|EMBL:ERS09420.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp
SCNpilot_cont_300_bf_scaffold_33_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

258..1127
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EC2748 rbh
amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
amino acid ABC transporter
SCNpilot_cont_300_bf_scaffold_33_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1130..2053
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000375C515 rbh
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
amino acid ABC transporter
SCNpilot_cont_300_bf_scaffold_33_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2037..2777
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00036D4865
monosaccharide-transporting ATPase; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
ABC transporter
SCNpilot_cont_300_bf_scaffold_33_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2777..3481
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002FBDCEC rbh
amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
SCNpilot_cont_300_bf_scaffold_33_6
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(3512..4582)
DNA (1071bp) protein (357aa)
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=452637 species="Bacteria; Verr
Diaminopimelate epimerase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ82_OPITP
SCNpilot_cont_300_bf_scaffold_33_7
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4706..6883)
DNA (2178bp) protein (726aa)
malic enzyme (EC:1.1.1.40 2.3.1.8)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase {ECO:0000313|EMBL:ACA15767.1}; EC=1.1.1.40 {ECO:0000313|EMBL:ACA15767.1};; EC=2.3.1.8 {ECO:0000313|EMBL:ACA15
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UGS4_METS4
SCNpilot_cont_300_bf_scaffold_33_8
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7208..8626
DNA (1419bp) protein (473aa)
Oxidoreductase n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VP37_9CYAN rbh
Oxidoreductase {ECO:0000313|EMBL:ESA33782.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;"
oxidoreductase
SCNpilot_cont_300_bf_scaffold_33_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8782..10992
DNA (2211bp) protein (737aa)
molybdopterin oxidoreductase, molybdopterin binding subunit; K00183 molybdopterin oxidoreductase, molybdopterin binding subunit [EC:1.2.7.-] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003652384 rbh
molybdopterin oxidoreductase
SCNpilot_cont_300_bf_scaffold_33_10
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11050..11817
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000382DC28
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CCC98600.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum b
SCNpilot_cont_300_bf_scaffold_33_11
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11844..12476
DNA (633bp) protein (211aa)
Glutathione S-transferase n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KMM3_9GAMM
Glutathione S-transferase {ECO:0000313|EMBL:EPC03362.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticar
glutathione S-transferase
SCNpilot_cont_300_bf_scaffold_33_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12498..14081)
DNA (1584bp) protein (528aa)
acyl-CoA synthetase (EC:2.3.1.86)
acyl-CoA synthetase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037DF19D rbh
Bll7864 protein {ECO:0000313|EMBL:BAC53129.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoeffici
SCNpilot_cont_300_bf_scaffold_33_13
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14240..14542)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035C4A6F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL79366.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
SCNpilot_cont_300_bf_scaffold_33_14
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14734..16266)
DNA (1533bp) protein (511aa)
carboxypeptidase n=1 Tax=Rhizobium leguminosarum RepID=UPI000380B39F rbh
carboxypeptidase
Carboxypeptidase {ECO:0000313|EMBL:AHF86594.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhiz
SCNpilot_cont_300_bf_scaffold_33_15
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16464..17234
DNA (771bp) protein (257aa)
ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IEK3_9BRAD rbh
ABC transporter {ECO:0000313|EMBL:KJC57679.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM2
ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_33_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17231..18760
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S706_9BRAD rbh
Permease {ECO:0000313|EMBL:KIZ42990.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
permease
SCNpilot_cont_300_bf_scaffold_33_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18778..19149)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBS4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37070.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
SCNpilot_cont_300_bf_scaffold_33_18
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19308..19538
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QG37_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09979.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_33_19
unknown

Not on your lists

comp(19614..19736)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_33_20
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19866..20465)
DNA (600bp) protein (200aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidored
NAD(P)H dehydrogenase (quinone) n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZEN3_9BRAD rbh
flavoprotein WrbA
SCNpilot_cont_300_bf_scaffold_33_21
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20619..21317)
DNA (699bp) protein (233aa)
Pirin n=2 Tax=Oligotropha carboxidovorans RepID=B6JBZ7_OLICO rbh
pirin family protein
Pirin family protein {ECO:0000313|EMBL:AEI07576.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovor
SCNpilot_cont_300_bf_scaffold_33_22
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21425..22342
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRH1_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31054.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_33_23
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22473..23015
DNA (543bp) protein (181aa)
Methylated-DNA-[protein]-cysteine S-methyltransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H575_9BRAD
Cysteine methyltransferase {ECO:0000313|EMBL:KJC47147.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
methylated-DNA--protein-cysteine methyltransferase
SCNpilot_cont_300_bf_scaffold_33_24
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23260..23877)
DNA (618bp) protein (206aa)
Putative Glutathione S-transferase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TUS4_9BRAD rbh
Glutathione S-transferase {ECO:0000313|EMBL:ETR77061.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
glutathione S-transferase
SCNpilot_cont_300_bf_scaffold_33_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23971..24813)
DNA (843bp) protein (281aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconate delta-isomerase {ECO:0000313|EMBL:ABE41304.1}; EC=5.3.3.10 {ECO:0000313|EMBL:ABE41304.1};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob
5-carboxymethyl-2-hydroxymuconate delta-isomerase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q131D5_RHOPS rbh
SCNpilot_cont_300_bf_scaffold_33_26
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24896..25738)
DNA (843bp) protein (281aa)
beta-lactamase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037C93FE rbh
Beta-lactamase {ECO:0000313|EMBL:KIZ34884.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.
Beta-lactamase-like
SCNpilot_cont_300_bf_scaffold_33_27
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25859..26272
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q219M5_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD86911.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
SCNpilot_cont_300_bf_scaffold_33_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26283..27065)
DNA (783bp) protein (261aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20ZV7_RHOPB rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABD89329.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseu
SCNpilot_cont_300_bf_scaffold_33_29
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27391..29001)
DNA (1611bp) protein (537aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H5Z0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ERF79881.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
glucose-methanol-choline oxidoreductase
SCNpilot_cont_300_bf_scaffold_33_30
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29044..30474)
DNA (1431bp) protein (477aa)
Aldehyde dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1I8P9_9BRAD rbh
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s
aldehyde dehydrogenase
Displaying items 1-30 of 434 in total

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