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SCNpilot_cont_300_bf_scaffold_1880

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1880_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(428..1075)
DNA (648bp) protein (216aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
Endonuclease III n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIM2_NIAKG rbh
endonuclease III
SCNpilot_cont_300_bf_scaffold_1880_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1115..1831)
DNA (717bp) protein (239aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7K0_NIAKG
uridylate kinase
SCNpilot_cont_300_bf_scaffold_1880_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1862..2947)
DNA (1086bp) protein (362aa)
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:ACU58275.1}; EC=2.7.7.13 {ECO:0000313|EMBL:ACU58275.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales;
Mannose-1-phosphate guanylyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJT4_CHIPD rbh
mannose-1-phosphate guanylyltransferase
SCNpilot_cont_300_bf_scaffold_1880_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3067..3288
DNA (222bp) protein (74aa)
FeoA family protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4V8_9SPHI
FeoA family protein
FeoA family protein {ECO:0000313|EMBL:EHQ28286.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacte
SCNpilot_cont_300_bf_scaffold_1880_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3342..3911
DNA (570bp) protein (190aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJU8_CHIPD
nicotinate (nicotinamide) nucleotide adenylyltransferase
SCNpilot_cont_300_bf_scaffold_1880_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4274..5734)
DNA (1461bp) protein (487aa)
RNA polymerase, sigma 54 subunit, RpoN n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK09_CHIPD rbh
RNA polymerase sigma-54 subunit RpoN
RNA polymerase, sigma 54 subunit, RpoN {ECO:0000313|EMBL:ACU58350.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chi
SCNpilot_cont_300_bf_scaffold_1880_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5875..7086
DNA (1212bp) protein (404aa)
Alanine dehydrogenase {ECO:0000313|EMBL:ACU58757.1}; EC=1.4.1.1 {ECO:0000313|EMBL:ACU58757.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; C
Alanine dehydrogenase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ68_CHIPD rbh
alanine dehydrogenase
SCNpilot_cont_300_bf_scaffold_1880_8
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7131..7496
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X671_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIC64348.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1880_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7608..8492
DNA (885bp) protein (295aa)
Flavin reductase domain protein FMN-binding n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG15_CHIPD rbh
flavin reductase
Flavin reductase domain protein FMN-binding {ECO:0000313|EMBL:ACU57998.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source
SCNpilot_cont_300_bf_scaffold_1880_10
unknown

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8504..8653
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1880_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8683..9963
DNA (1281bp) protein (427aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV99_CHIPD rbh
glycine hydroxymethyltransferase
Displaying 11 items

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