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SCNpilot_cont_300_bf_scaffold_302

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_302_1
unknown

Not on your lists

comp(1..96)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_302_2
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

520..1155
DNA (636bp) protein (212aa)
Putative threonine efflux protein n=1 Tax=Rhizobium sp. CF142 RepID=J1TCD1_9RHIZ rbh
leucine efflux protein
Putative threonine efflux protein {ECO:0000313|EMBL:EJJ29461.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacte
SCNpilot_cont_300_bf_scaffold_302_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1157..2083)
DNA (927bp) protein (309aa)
Transcriptional family n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGH9_9BURK rbh
Transcriptional family {ECO:0000313|EMBL:EIK88319.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_302_4
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2206..3156
DNA (951bp) protein (317aa)
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D7E1_STEMA
Thioredoxin reductase {ECO:0000313|EMBL:AKC88021.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomo
SCNpilot_cont_300_bf_scaffold_302_5
Bifidobacterium psychraerophilum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3220..4116
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1YPR8_9BACI
Threonyl-tRNA synthetase {ECO:0000313|EMBL:KFI81609.1}; TaxID=218140 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium psychraerophil
hypothetical protein
SCNpilot_cont_300_bf_scaffold_302_6
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4104..4760)
DNA (657bp) protein (219aa)
Glutathione S-transferase domain protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8RGJ4_9BURK
glutathione S-transferase, N-terminal domain protein
Glutathione S-transferase domain protein {ECO:0000313|EMBL:EKS70293.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="B
SCNpilot_cont_300_bf_scaffold_302_7
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4774..5844)
DNA (1071bp) protein (357aa)
Phenylacetaldoxime dehydratase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S843_9BURK rbh
Phenylacetaldoxime dehydratase {ECO:0000313|EMBL:EHP41312.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus
phenylacetaldoxime dehydratase
SCNpilot_cont_300_bf_scaffold_302_8
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5868..7499)
DNA (1632bp) protein (544aa)
Major facilitator transporter n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QH70_RALPI rbh
major facilitator transporter
Major facilitator transporter {ECO:0000313|EMBL:AGW90310.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pick
SCNpilot_cont_300_bf_scaffold_302_9
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7536..8468)
DNA (933bp) protein (311aa)
nitA1; aliphatic nitrilase NitA (EC:3.5.5.7)
Aliphatic nitrilase NitA {ECO:0000313|EMBL:AJK49002.1}; EC=3.5.5.7 {ECO:0000313|EMBL:AJK49002.1};; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae
Nitrilase n=1 Tax=uncultured bacterium RepID=E1A0Z9_9BACT rbh
SCNpilot_cont_300_bf_scaffold_302_10
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8593..9486
DNA (894bp) protein (298aa)
Transcriptional regulator LysR family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GXH1_CUPNN rbh
LysR family transcriptional regulator
Transcriptional regulator LysR family {ECO:0000313|EMBL:AEI82041.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupr
SCNpilot_cont_300_bf_scaffold_302_11
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9502..9981)
DNA (480bp) protein (160aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI000373EE87 rbh
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:ESX78584.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source
3-demethylubiquinone-9 3-methyltransferase
SCNpilot_cont_300_bf_scaffold_302_12
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10191..10598
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IUE3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIF34345.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. C
putative glutathione-dependent formaldehyde-activating enzyme
SCNpilot_cont_300_bf_scaffold_302_13
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10760..11491)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003491A75 rbh
Anti-sigma-K factor RskA {ECO:0000313|EMBL:KHQ94267.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;
anti-sigma-K factor RskA
SCNpilot_cont_300_bf_scaffold_302_14
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11488..11814)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003767928
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KHS00252.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnom
RNA polymerase subunit sigma-24
SCNpilot_cont_300_bf_scaffold_302_15
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12285..12869
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000345EB5E rbh
fasciclin
Fasciclin {ECO:0000313|EMBL:AJC18700.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
SCNpilot_cont_300_bf_scaffold_302_16
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13098..13448)
DNA (351bp) protein (117aa)
Glutathione-dependent formaldehyde-activating, GFA n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V8A1_SPHWW
glutathione-dependent formaldehyde-activating protein
Glutathione-dependent formaldehyde-activating, GFA {ECO:0000313|EMBL:ABQ68517.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas
SCNpilot_cont_300_bf_scaffold_302_17
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13468..15372)
DNA (1905bp) protein (635aa)
ATPase component ABC-type dipeptide/oligopeptide/nickel transport system n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGM3_METPP rbh
peptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150
peptide ABC transporter ATPase
SCNpilot_cont_300_bf_scaffold_302_18
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15372..16835)
DNA (1464bp) protein (488aa)
Putative oligopeptide ABC-transporter permease n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HX90_BORPD rbh
oligopeptide ABC-transporter permease
Putative oligopeptide ABC-transporter permease {ECO:0000313|EMBL:CAP43732.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source=
SCNpilot_cont_300_bf_scaffold_302_19
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16840..17817)
DNA (978bp) protein (326aa)
Oligopeptide transport system permease protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HX92_BORPD rbh
ABC transporter, permease protein {ECO:0000313|EMBL:KCV64739.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella
oligopeptide transport system permease
SCNpilot_cont_300_bf_scaffold_302_20
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17814..20111)
DNA (2298bp) protein (766aa)
Putative extracellular solute-binding protein n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MUE0_BORBM rbh
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:KCV64742.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;"
extracellular solute-binding protein
SCNpilot_cont_300_bf_scaffold_302_21
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20315..21280
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8M2_9BURK
hypothetical protein Tax=GWA2_Curvibacter_64_110_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_302_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21293..22021)
DNA (729bp) protein (243aa)
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI0003828356
ompw family protein
OmpW family protein {ECO:0000313|EMBL:ADU35274.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
SCNpilot_cont_300_bf_scaffold_302_23
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22202..23116
DNA (915bp) protein (305aa)
BrkB transmembrane protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I688_BORPD rbh
BrkB transmembrane protein
BrkB transmembrane protein {ECO:0000313|EMBL:CAP44279.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (
SCNpilot_cont_300_bf_scaffold_302_24
unknown

Not on your lists

23155..23463
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_302_25
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23474..23674)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X8J9_9BURK
Putative N-acetyltransferase YedL {ECO:0000313|EMBL:KCV59295.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella
hypothetical protein
SCNpilot_cont_300_bf_scaffold_302_26
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23751..24155)
DNA (405bp) protein (135aa)
endoribonuclease L-PSP n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037F8D2D
Endoribonuclease L-PSP {ECO:0000313|EMBL:EZP39623.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacteri
endoribonuclease L-PSP family protein
SCNpilot_cont_300_bf_scaffold_302_27
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24177..25364)
DNA (1188bp) protein (396aa)
acyl-CoA dehydrogenase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395733F rbh
putative acyl-CoA dehydrogenase
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:CDM25522.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellan
SCNpilot_cont_300_bf_scaffold_302_28
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25474..26301)
DNA (828bp) protein (276aa)
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ELX13279.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ELX13279.1};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobact
Enoyl-CoA hydratase/isomerase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PNT9_9BURK rbh
hypothetical protein
SCNpilot_cont_300_bf_scaffold_302_29
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26334..26885)
DNA (552bp) protein (184aa)
Transcriptional regulator MarR family n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PQZ1_9BURK
Transcriptional regulator MarR family {ECO:0000313|EMBL:ELX13278.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source
marR family protein
SCNpilot_cont_300_bf_scaffold_302_30
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26896..27669)
DNA (774bp) protein (258aa)
oxidoreductase (EC:1.-.-.-)
Putative oxidoreductase {ECO:0000313|EMBL:CAP40882.1}; EC=1.-.-.- {ECO:0000313|EMBL:CAP40882.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; B
Putative oxidoreductase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I1P0_BORPD rbh
Displaying items 1-30 of 95 in total

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