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SCNpilot_cont_300_bf_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 234 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_57_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..85)
DNA (84bp) protein (28aa)
NAD(P)(+) transhydrogenase (AB-specific) {ECO:0000313|EMBL:ACS22611.1}; EC=1.6.1.2 {ECO:0000313|EMBL:ACS22611.1};; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
SCNpilot_cont_300_bf_scaffold_57_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

529..1245
DNA (717bp) protein (239aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3E8_VARPE rbh
Variovorax paradoxus strain MEDvA23 contig_67, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25629.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
winged helix family two component transcriptional regulator
SCNpilot_cont_300_bf_scaffold_57_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1322..1747
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KHX0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79800.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
hypothetical protein
SCNpilot_cont_300_bf_scaffold_57_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1778..2269
DNA (492bp) protein (164aa)
ADP-ribose pyrophosphatase n=1 Tax=Variovorax sp. CF313 RepID=J3CWQ0_9BURK
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:EJL79801.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF3
nudix hydrolase
SCNpilot_cont_300_bf_scaffold_57_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2271..3380)
DNA (1110bp) protein (370aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
thiouridylase n=1 Tax=Variovorax paradoxus RepID=UPI0003767101 rbh
SCNpilot_cont_300_bf_scaffold_57_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3525..5252
DNA (1728bp) protein (576aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Variovorax sp. CF313 RepID=J2L3I0_9BURK rbh
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EJL79803.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
AMP-dependent synthetase and ligase
SCNpilot_cont_300_bf_scaffold_57_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5266..6264)
DNA (999bp) protein (333aa)
Luciferase family oxidoreductase, group 1 n=1 Tax=Variovorax sp. CF313 RepID=J3CWA1_9BURK rbh
Luciferase family oxidoreductase, group 1 {ECO:0000313|EMBL:EJL79804.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
luciferase family oxidoreductase, group 1
SCNpilot_cont_300_bf_scaffold_57_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6309..7991)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3E3_VARPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU34633.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
SCNpilot_cont_300_bf_scaffold_57_9
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8040..8639)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000361ADC5 rbh
Strain MEJ086 contig_63, whole genome shotgun sequence {ECO:0000313|EMBL:KIP96330.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
hypothetical protein
SCNpilot_cont_300_bf_scaffold_57_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8653..10455)
DNA (1803bp) protein (601aa)
VanW family protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3E2_VARPE rbh
vanw family protein
VanW family protein {ECO:0000313|EMBL:ADU34632.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (stra
SCNpilot_cont_300_bf_scaffold_57_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10452..11057)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KHX4_9BURK rbh
Variovorax paradoxus strain MEDvA23 contig_67, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25623.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
SCNpilot_cont_300_bf_scaffold_57_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11274..11933
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3E0_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU34630.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
SCNpilot_cont_300_bf_scaffold_57_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11944..12621)
DNA (678bp) protein (226aa)
Nicotinamidase-like amidase n=1 Tax=Burkholderia sp. BT03 RepID=J2HM43_9BURK
Variovorax paradoxus strain MEDvA23 contig_67, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25622.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
isochorismatase hydrolase
SCNpilot_cont_300_bf_scaffold_57_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12674..13054)
DNA (381bp) protein (127aa)
helicase SNF2 n=1 Tax=Variovorax paradoxus RepID=UPI00036F30F5
snf2 superfamily protein
SNF2 superfamily protein {ECO:0000313|EMBL:ADU34629.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
SCNpilot_cont_300_bf_scaffold_57_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13240..13731
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2L3I5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79808.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_57_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13738..14328)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CWA3_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL79809.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
bioy protein
SCNpilot_cont_300_bf_scaffold_57_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14369..14962)
DNA (594bp) protein (198aa)
ABC-type cobalt transport system, permease component CbiQ n=1 Tax=Variovorax sp. CF313 RepID=J2KHX8_9BURK rbh
ABC-type cobalt transport system, permease component CbiQ {ECO:0000313|EMBL:EJL79810.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovora
cobalt transport protein
SCNpilot_cont_300_bf_scaffold_57_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14955..15674)
DNA (720bp) protein (240aa)
ABC-type cobalt transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J3CWQ5_9BURK rbh
ABC-type cobalt transport system, ATPase component {ECO:0000313|EMBL:EJL79811.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
ABC transporter
SCNpilot_cont_300_bf_scaffold_57_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15744..16586)
DNA (843bp) protein (281aa)
phosphonomutase n=1 Tax=Variovorax paradoxus RepID=UPI000365F361 rbh
PEP phosphonomutase-like enzyme {ECO:0000313|EMBL:EJL79812.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp
pep phosphonomutase and related enzymes-like protein
SCNpilot_cont_300_bf_scaffold_57_20
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16660..17955)
DNA (1296bp) protein (432aa)
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000363F1DF rbh
MFS permease
Probable MFS permease {ECO:0000313|EMBL:CAP45237.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strai
SCNpilot_cont_300_bf_scaffold_57_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17952..20294)
DNA (2343bp) protein (781aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035FC492 rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL71352.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_57_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20291..21703)
DNA (1413bp) protein (471aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC:2.6.1.62)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00038212BF rbh
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:EJL71354.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovor
SCNpilot_cont_300_bf_scaffold_57_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21807..22724
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000371AB51 rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL71355.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_57_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22708..24441)
DNA (1734bp) protein (578aa)
Zinc carboxypeptidase n=1 Tax=Variovorax sp. CF313 RepID=J2L3I9_9BURK rbh
Zinc carboxypeptidase {ECO:0000313|EMBL:EJL79813.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
peptidase, family M14
SCNpilot_cont_300_bf_scaffold_57_25
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24455..25264)
DNA (810bp) protein (270aa)
ABC transporter n=1 Tax=Paracoccus sp. N5 RepID=UPI00037D8E67
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ABL69357.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus
SCNpilot_cont_300_bf_scaffold_57_26
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25254..26102)
DNA (849bp) protein (283aa)
ABC transporter related n=1 Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=B9KMD6_RHOSK
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACM02027.1}; TaxID=557760 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaer
SCNpilot_cont_300_bf_scaffold_57_27
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26095..26991)
DNA (897bp) protein (299aa)
cytochrome C550 n=1 Tax=Oceanicola sp. S124 RepID=UPI0002558172 rbh
D-ala-D-ala transporter subunit {ECO:0000313|EMBL:KKB85141.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM
D,D-dipeptide transport system permease protein
SCNpilot_cont_300_bf_scaffold_57_28
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26988..28010)
DNA (1023bp) protein (341aa)
Dipeptide transport system permease protein DppB n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RAN4_9RHIZ
Peptide ABC transporter permease {ECO:0000313|EMBL:KGJ07072.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus
binding-protein-dependent transport system inner membrane protein
SCNpilot_cont_300_bf_scaffold_57_29
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28021..29595)
DNA (1575bp) protein (525aa)
Extracellular solute-binding protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C0V9_9RHIZ rbh
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM34718.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;
ABC-type dipeptide transport system, periplasmic component
SCNpilot_cont_300_bf_scaffold_57_30
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29651..30121)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs1 RepID=S6GG39_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGJ20956.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 109
GAF sensor protein
Displaying items 1-30 of 234 in total

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