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SCNpilot_cont_300_bf_scaffold_126

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Displaying items 1-30 of 304 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_126_1
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(258..800)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2JMK9_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL69095.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_126_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

919..1899
DNA (981bp) protein (327aa)
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V078_VARPE rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU34392.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
SCNpilot_cont_300_bf_scaffold_126_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1913..2086)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2SU33_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL69097.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
hypothetical protein
SCNpilot_cont_300_bf_scaffold_126_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2213..3019
DNA (807bp) protein (269aa)
Putative phosphohydrolase n=1 Tax=Variovorax sp. CF313 RepID=J2K7A4_9BURK rbh
Putative phosphohydrolase {ECO:0000313|EMBL:EJL69098.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
metallophosphoesterase
SCNpilot_cont_300_bf_scaffold_126_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3127..4623
DNA (1497bp) protein (499aa)
amidase (EC:6.3.5.-)
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit n=1 Tax=Variovorax sp. CF313 RepID=J3CCX7_9BURK rbh
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:EJL69099.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
SCNpilot_cont_300_bf_scaffold_126_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4636..5253)
DNA (618bp) protein (206aa)
Regulatory protein TetR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V075_VARPE rbh
Variovorax paradoxus strain MEDvA23 contig_74, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ24254.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_126_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5340..6074)
DNA (735bp) protein (245aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2JML4_9BURK rbh
Variovorax paradoxus strain MEDvA23 contig_74, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ24253.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_126_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6337..7671
DNA (1335bp) protein (445aa)
Rieske (2Fe-2S) iron-sulfur domain n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V073_VARPE rbh
Variovorax paradoxus strain MEDvA23 contig_74, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ24252.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
rieske (2fe-2S) iron-sulfur domain
SCNpilot_cont_300_bf_scaffold_126_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7682..9130
DNA (1449bp) protein (483aa)
Glutamine synthetase n=1 Tax=Variovorax sp. CF313 RepID=J2SU37_9BURK rbh
Glutamine synthetase {ECO:0000313|EMBL:EJL69102.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative glutamate--ammonia ligase
SCNpilot_cont_300_bf_scaffold_126_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9150..9473
DNA (324bp) protein (108aa)
ferredoxin n=1 Tax=Variovorax paradoxus RepID=UPI00035E9D74
Ferredoxin {ECO:0000313|EMBL:EJL69103.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative ferredoxin
SCNpilot_cont_300_bf_scaffold_126_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9569..10762
DNA (1194bp) protein (398aa)
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003745999 rbh
putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein
Putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein {ECO:0000313|EMBL:AGU47301.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteoba
SCNpilot_cont_300_bf_scaffold_126_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10830..11690
DNA (861bp) protein (287aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J2JML7_9BURK rbh
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJL69105.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
putative high-affinity branched-chain amino acid ABC transporter, permease protein
SCNpilot_cont_300_bf_scaffold_126_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11687..12649
DNA (963bp) protein (321aa)
Inner-membrane translocator n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V068_VARPE rbh
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADU34382.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradox
SCNpilot_cont_300_bf_scaffold_126_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12646..13416
DNA (771bp) protein (257aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J2SU40_9BURK rbh
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL69107.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
putative high-affinity branched-chain amino acid ABC transporter, ATP-binding protein
SCNpilot_cont_300_bf_scaffold_126_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13409..14113
DNA (705bp) protein (235aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J2K7B3_9BURK rbh
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL69108.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
ABC transporter
SCNpilot_cont_300_bf_scaffold_126_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14219..15376)
DNA (1158bp) protein (386aa)
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036F679E rbh
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL69517.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
putative extracellular ligand-binding receptor
SCNpilot_cont_300_bf_scaffold_126_17
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15480..16832)
DNA (1353bp) protein (451aa)
Cytochrome c551 peroxidase (EC:1.11.1.5)
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22111.1}; EC=1.11.1.5 {ECO:0000313|EMBL:AJG22111.1};; TaxID=68895 species="Bacteria; Proteobacteria; Bet
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000382DF50 rbh
SCNpilot_cont_300_bf_scaffold_126_18
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16829..18397)
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036F00C3 rbh
Serine/threonine protein phosphatase {ECO:0000313|EMBL:KJK20531.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae b
calcineurin-like phosphoesterase family protein
SCNpilot_cont_300_bf_scaffold_126_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18493..20076)
DNA (1584bp) protein (528aa)
phospholipase n=1 Tax=Variovorax paradoxus RepID=UPI00036B9131 rbh
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase {ECO:0000313|EMBL:EJL69518.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
phospholipase d/transphosphatidylase
SCNpilot_cont_300_bf_scaffold_126_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20162..21391
DNA (1230bp) protein (410aa)
Putative membrane protein required for spore maturation n=1 Tax=Variovorax sp. CF313 RepID=J3CDL8_9BURK rbh
Putative membrane protein required for spore maturation {ECO:0000313|EMBL:EJL69519.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
nucleoside recognition domain-containing protein
SCNpilot_cont_300_bf_scaffold_126_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21373..23364)
DNA (1992bp) protein (664aa)
Alkyl sulfatase-like hydrolase n=1 Tax=Variovorax sp. CF313 RepID=J2JNZ0_9BURK rbh
Alkyl sulfatase-like hydrolase {ECO:0000313|EMBL:EJL69520.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sou
steroL-binding domain-containing protein
SCNpilot_cont_300_bf_scaffold_126_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23438..24367
DNA (930bp) protein (310aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CDZ7_9BURK rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL69521.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_126_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24478..24921
DNA (444bp) protein (148aa)
Conserved protein of DIM6/NTAB family n=1 Tax=Variovorax sp. CF313 RepID=J2SVE1_9BURK
Conserved protein of DIM6/NTAB family {ECO:0000313|EMBL:EJL69522.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax
flavin reductase-like domain-containing protein
SCNpilot_cont_300_bf_scaffold_126_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24918..25418
DNA (501bp) protein (167aa)
Putative periplasmic or secreted lipoprotein n=1 Tax=Variovorax sp. CF313 RepID=J2K8J4_9BURK rbh
Putative periplasmic or secreted lipoprotein {ECO:0000313|EMBL:EJL69523.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Var
putative periplasmic phospholipid-binding protein
SCNpilot_cont_300_bf_scaffold_126_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25510..26418
DNA (909bp) protein (303aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Variovorax sp. CF313 RepID=J3CDM1_9BURK rbh
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:EJL69524.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada
hypothetical protein
SCNpilot_cont_300_bf_scaffold_126_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26415..27368
DNA (954bp) protein (318aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=1144315 species="Bacteria; Proteobacte
glutaminase, core (EC:3.5.1.2)
Glutaminase n=1 Tax=Variovorax sp. CF313 RepID=J2JNZ5_9BURK rbh
SCNpilot_cont_300_bf_scaffold_126_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27382..28374)
DNA (993bp) protein (331aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Variovorax sp. CF313 RepID=J3CDZ9_9BURK rbh
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EJL69526.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
NADH(P)-binding domain-containing protein
SCNpilot_cont_300_bf_scaffold_126_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28470..29417
DNA (948bp) protein (316aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2SVE4_9BURK rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL69527.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
LysR family transcriptional regulator rbh
SCNpilot_cont_300_bf_scaffold_126_29
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29414..29908
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000372C2EB rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL69528.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_126_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30287..31480
DNA (1194bp) protein (398aa)
Putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X4C3_VARPD rbh
putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein
Putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein {ECO:0000313|EMBL:AGU47286.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteoba
Displaying items 1-30 of 304 in total

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