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SCNpilot_cont_300_bf_scaffold_403

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_403_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(284..640)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RMG5_COMTE
Putative uncharacterized protein {ECO:0000313|EMBL:EHN66493.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas tes
SCNpilot_cont_300_bf_scaffold_403_2
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2096..4252)
DNA (2157bp) protein (719aa)
Phage integrase n=1 Tax=Janthinobacterium sp. HH01 PF01_9BURK">RepID=L9PF01_9BURK rbh
putative phage integrase
Putative phage integrase {ECO:0000313|EMBL:CDG84020.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobac
SCNpilot_cont_300_bf_scaffold_403_3
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4252..6132)
DNA (1881bp) protein (627aa)
hypothetical protein n=1 Tax=Janthinobacterium lividum RepID=UPI0002891DC7 rbh
Uncharacterized protein {ECO:0000313|EMBL:ELX10181.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobact
putative uncharacterized protein h16_A0821
SCNpilot_cont_300_bf_scaffold_403_4
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6129..7694)
DNA (1566bp) protein (522aa)
site-specific recombinase XerD n=1 Tax=Janthinobacterium lividum RepID=UPI00028830CC rbh
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:CDG84022.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janth
SCNpilot_cont_300_bf_scaffold_403_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8262..8705
DNA (444bp) protein (148aa)
phospholipase n=1 Tax=Variovorax paradoxus RepID=UPI000376CA31
phospholipase d/transphosphatidylase
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:ADU38624.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovora
SCNpilot_cont_300_bf_scaffold_403_6
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8683..9054)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XL50_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EON20049.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_403_7
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9126..9611
DNA (486bp) protein (162aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SYP3_JANMA
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ABR91229.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Jan
SCNpilot_cont_300_bf_scaffold_403_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9693..10040
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XFE3_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU51049.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
SCNpilot_cont_300_bf_scaffold_403_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10052..10522)
DNA (471bp) protein (157aa)
GCN5-related N-acetyltransferase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VB82_VARPE
GCN5-like N-acetyltransferaser
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADU38612.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax pa
SCNpilot_cont_300_bf_scaffold_403_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10586..11557)
DNA (972bp) protein (324aa)
cobalamin biosynthesis protein P47K n=1 Tax=Variovorax paradoxus RepID=UPI0003647AB2 rbh
cobalamin synthesis protein p47k
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:ADU38611.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax pa
SCNpilot_cont_300_bf_scaffold_403_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11565..13241)
DNA (1677bp) protein (559aa)
Amidohydrolase 3 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VB80_VARPE rbh
amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:ADU38610.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain
SCNpilot_cont_300_bf_scaffold_403_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13238..14275)
DNA (1038bp) protein (346aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000382A0FD rbh
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ADU38609.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
SCNpilot_cont_300_bf_scaffold_403_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14272..15324)
DNA (1053bp) protein (351aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00037FF4E4 rbh
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ADU38608.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
SCNpilot_cont_300_bf_scaffold_403_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15475..16386)
DNA (912bp) protein (304aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VB77_VARPE rbh
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU38607.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
SCNpilot_cont_300_bf_scaffold_403_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16383..17369)
DNA (987bp) protein (329aa)
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00037B44E9 rbh
putative peptide ABC transporter, permease protein
Putative peptide ABC transporter, permease protein {ECO:0000313|EMBL:AGU51042.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
SCNpilot_cont_300_bf_scaffold_403_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17382..18995)
DNA (1614bp) protein (538aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000378F8CB rbh
family 5 extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADU38605.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Var
SCNpilot_cont_300_bf_scaffold_403_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19195..20685)
DNA (1491bp) protein (497aa)
FAD-dependent oxidoreductase n=1 Tax=Variovorax paradoxus RepID=UPI000381AAE7 rbh
fad dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADU38604.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax parado
SCNpilot_cont_300_bf_scaffold_403_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20729..21151)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VB73_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU38603.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
SCNpilot_cont_300_bf_scaffold_403_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21291..22826
DNA (1536bp) protein (512aa)
Transcriptional regulator, GntR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VB72_VARPE rbh
Variovorax paradoxus strain MEDvA23 contig_80, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22977.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_403_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23004..24014
DNA (1011bp) protein (337aa)
Putative aliphatic sulfonates/taurine ABC transporter, periplasmic binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XEU3_VARPD rbh
putative aliphatic sulfonates/taurine ABC transporter, periplasmic binding protein
Putative aliphatic sulfonates/taurine ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:AGU51036.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
SCNpilot_cont_300_bf_scaffold_403_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24068..24856
DNA (789bp) protein (263aa)
ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036A3CD9 rbh
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADU38599.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax par
SCNpilot_cont_300_bf_scaffold_403_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24849..25745
DNA (897bp) protein (299aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VB68_VARPE rbh
Variovorax paradoxus strain MEDvA23 contig_97, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ20481.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
binding-protein-dependent transport systems inner membrane component
SCNpilot_cont_300_bf_scaffold_403_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25663..26757)
DNA (1095bp) protein (365aa)
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VB67_VARPE rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU38597.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
SCNpilot_cont_300_bf_scaffold_403_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27022..27324
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZF8_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU36671.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
SCNpilot_cont_300_bf_scaffold_403_25
unknown

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comp(27429..27824)
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_403_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28490..28756
DNA (267bp) protein (89aa)
Flagellar biosynthesis pathway, component FliQ n=1 Tax=Variovorax sp. CF313 RepID=J3CIN1_9BURK
Flagellar biosynthesis pathway, component FliQ {ECO:0000313|EMBL:EJL72206.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source
export protein FliQ family 3
SCNpilot_cont_300_bf_scaffold_403_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28771..29574
DNA (804bp) protein (268aa)
Flagellar biosynthesis pathway, component FliR n=1 Tax=Variovorax sp. CF313 RepID=J2JWH5_9BURK rbh
Flagellar biosynthesis pathway, component FliR {ECO:0000313|EMBL:EJL72205.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; V
type III secretion system inner membrane R protein
SCNpilot_cont_300_bf_scaffold_403_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29574..30668
DNA (1095bp) protein (365aa)
Type III secretion exporter n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXN4_VARPS rbh
type III secretion exporter
Type III secretion exporter {ECO:0000313|EMBL:ACS18890.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradox
SCNpilot_cont_300_bf_scaffold_403_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30665..32776
DNA (2112bp) protein (704aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXN5_VARPS rbh
flagellar biosynthesis protein FlhA
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:ACS18891.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
SCNpilot_cont_300_bf_scaffold_403_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32796..33581
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXN6_VARPS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS18892.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
Displaying items 1-30 of 53 in total

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