name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_421_1
Pseudomonas sp. 21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..9539)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003811C8F
Uncharacterized protein {ECO:0000313|EMBL:KJK03110.1}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 2
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_421_2
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9718..10710)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036688FC
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACA95898.1}; TaxID=406425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkh
|
|
SCNpilot_cont_300_bf_scaffold_421_3
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11091..13022)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Me
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000374241D
rbh
ATPase domain-containing protein
|
|
SCNpilot_cont_300_bf_scaffold_421_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13082..13813
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037804E0
rbh
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AGU51780.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variov
|
|
SCNpilot_cont_300_bf_scaffold_421_5
Pseudomonas sp. GM55, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13870..14829)
|
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM55 RepID=J3GTY0_9PSED
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJM74952.1}; Flags: Precursor;; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source
Amidinotransferase
rbh
|
|
SCNpilot_cont_300_bf_scaffold_421_6
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14856..15905)
|
Ornithine cyclodeaminase (EC:4.3.1.12)
Probable ornithine cyclodeaminase protein {ECO:0000313|EMBL:CAD17634.1}; EC=4.3.1.12 {ECO:0000313|EMBL:CAD17634.1};; TaxID=267608 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales
Ornithine cyclodeaminase n=3 Tax=Ralstonia solanacearum RepID=M4ULD9_RALSL
rbh
|
|
SCNpilot_cont_300_bf_scaffold_421_7
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16046..16468
|
AsnC family transcriptional regulator n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036EF69C
AsnC family transcriptional regulator {ECO:0000313|EMBL:GAE48684.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xan
AsnC family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_421_8
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16638..17402
|
Glutamate/aspartate ABC transport protein high affinity periplasmic solute-binding protein n=2 Tax=Ralstonia solanacearum RepID=F6G8C8_RALS8
rbh
glutamate/aspartate ABC transport protein high affinity periplasmic solute-binding protein
Glutamate/aspartate ABC transport protein high affinity periplasmic solute-binding protein {ECO:0000313|EMBL:AEG70957.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
|
|
SCNpilot_cont_300_bf_scaffold_421_9
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17428..18216
|
Putative amino acid transmembrane ABC transporter protein n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NGT3_RALSL
rbh
putative amino acid transmembrane ABC transporter protein
Putative amino acid transmembrane ABC transporter protein {ECO:0000313|EMBL:CBJ40107.1}; TaxID=859655 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstoni
|
|
SCNpilot_cont_300_bf_scaffold_421_10
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18213..18956
|
amino-acid transporter subunit ; ATP-binding component of ABC superfamily (EC:3.6.3.28)
Amino-acid transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CBJ53290.1}; EC=3.6.3.28 {ECO:0000313|EMBL:CBJ53290.1};; TaxID=859656 species="Bacteria; Proteobacteria; Betap
sulfate ABC transporter ATP-binding protein n=1 Tax=Ralstonia solanacearum RepID=UPI0003089B45
rbh
|
|
SCNpilot_cont_300_bf_scaffold_421_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19149..20642
|
Cytosine/uracil/thiamine/allantoin permease n=1 Tax=Variovorax sp. CF313 RepID=J2STQ8_9BURK
rbh
Cytosine/uracil/thiamine/allantoin permease {ECO:0000313|EMBL:EJL68972.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="V
cytosine/purines uracil thiamine allantoin permease
|
|
SCNpilot_cont_300_bf_scaffold_421_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20674..21411
|
hydantoin racemase (EC:5.1.99.5)
Asp/Glu racemase n=1 Tax=Variovorax paradoxus RepID=UPI00037A9321
rbh
Hydantoin racemase {ECO:0000313|EMBL:EJL68973.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_300_bf_scaffold_421_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21426..22190
|
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CCQ0_9BURK
rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL68974.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="
transcriptional regulator, GntR family
|
|
SCNpilot_cont_300_bf_scaffold_421_14
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22200..22760
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036EC157
rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:KEC74480.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhiz
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_421_15
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22887..24659
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000380E137
rbh
diguanylate cyclase/phosphodiesterase Tax=GWA2_Burkholderiales_64_37_curated
diguanylate cyclase/phosphodiesterase
|
|
SCNpilot_cont_300_bf_scaffold_421_16
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24726..25709
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000363FC1B
rbh
NAD-dependent epimerase/dehydratase family protein
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:AGS23291.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
|
|
SCNpilot_cont_300_bf_scaffold_421_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25861..27351
|
Xanthine permease n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CVQ2_VARPS
rbh
xanthine permease
Xanthine permease {ECO:0000313|EMBL:ACS20555.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain
|
|
SCNpilot_cont_300_bf_scaffold_421_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27362..28186)
|
Aldo/keto reductase, diketogulonate reductase n=1 Tax=Variovorax sp. CF313 RepID=J3CCQ2_9BURK
rbh
Aldo/keto reductase, diketogulonate reductase {ECO:0000313|EMBL:EJL68979.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source=
aldo/keto reductase
|
|
SCNpilot_cont_300_bf_scaffold_421_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28251..29720)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Vari
histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI00037370EB
rbh
integral membrane sensor signal transduction histidine kinase
|
|
SCNpilot_cont_300_bf_scaffold_421_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30071..31153
|
tartrate dehydrogenase (EC:4.1.1.73)
tartrate dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00036AD9E2
rbh
Tartrate dehydrogenase {ECO:0000313|EMBL:EJL68980.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;
|
|
SCNpilot_cont_300_bf_scaffold_421_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31193..32092
|
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V324_VARPE
rbh
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU39163.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
|
|
SCNpilot_cont_300_bf_scaffold_421_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32089..32916
|
ABC-type dipeptide/oligopeptide/nickel transport system, permease component (Fragment) n=1 Tax=Variovorax sp. CF313 RepID=J2JHC8_9BURK
rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJL67330.1}; Flags: Precursor; Fragment;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacte
binding-protein-dependent transport systems inner membrane component
|
|
SCNpilot_cont_300_bf_scaffold_421_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32924..33931
|
peptide ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000369688A
rbh
Variovorax paradoxus strain MEDvA23 contig_97, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ20565.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
oligopeptide/dipeptide ABC transporter ATPase
|
|
SCNpilot_cont_300_bf_scaffold_421_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33928..34743
|
peptide ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003677269
rbh
ATPase component of various ABC-type transport systems with duplicated ATPase domain {ECO:0000313|EMBL:EJL73732.1}; Flags: Fragment;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteri
putative oligopeptide/dipeptide ABC transporter, ATP-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_421_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34790..36283
|
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000362BE56
rbh
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EJL73731.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comam
family 5 extracellular solute-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_421_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
36288..37691
|
amidase n=1 Tax=Variovorax paradoxus RepID=UPI00036D4A35
rbh
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:EJL73730.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovo
amidase
|
|
SCNpilot_cont_300_bf_scaffold_421_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
37716..39164
|
NAD-dependent aldehyde dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J3CL18_9BURK
rbh
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EJL73729.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovor
aldehyde dehydrogenase
|
|
SCNpilot_cont_300_bf_scaffold_421_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
39174..40064
|
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
rbh
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J2KKX1_9BURK
rbh
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EJL73728.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
|
|
SCNpilot_cont_300_bf_scaffold_421_29
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(40516..41187)
|
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
TmRNA n=1 Tax=Variovorax sp. CF313 RepID=J2KG30_9BURK
rbh
phosphoglycolate phosphatase
|
|
SCNpilot_cont_300_bf_scaffold_421_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(41184..41903)
|
ubiquinone biosynthesis o-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Variovorax sp. CF313 RepID=J3CV62_9BURK
rbh
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiqui
|