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SCNpilot_cont_300_bf_scaffold_455

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_455_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..783
DNA (783bp) protein (261aa)
Putative AP endonuclease, family 2 n=1 Tax=Variovorax paradoxus B4 RepID=T1XIS7_VARPD
putative AP endonuclease, family 2
Putative AP endonuclease, family 2 {ECO:0000313|EMBL:AGU52468.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
SCNpilot_cont_300_bf_scaffold_455_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(789..1874)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYW1_VARPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU40086.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
SCNpilot_cont_300_bf_scaffold_455_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1960..3417)
DNA (1458bp) protein (486aa)
GntR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000375675B rbh
GntR family transcriptional regulator
Transcriptional regulator with HTH domain and aminotransferase domain containing protein {ECO:0000313|EMBL:EJL79680.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
SCNpilot_cont_300_bf_scaffold_455_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3503..4744
DNA (1242bp) protein (414aa)
Putative transporter, MFS-type n=1 Tax=Variovorax paradoxus B4 RepID=T1XK08_VARPD rbh
putative transporter, MFS-type
Putative transporter, MFS-type {ECO:0000313|EMBL:AGU52470.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax par
SCNpilot_cont_300_bf_scaffold_455_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5108..5356
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYW4_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU40089.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
SCNpilot_cont_300_bf_scaffold_455_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5415..5687
DNA (273bp) protein (91aa)
Translation initiation factor IF-1 n=2 Tax=Variovorax paradoxus RepID=C5CRD7_VARPS
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
SCNpilot_cont_300_bf_scaffold_455_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5772..7202
DNA (1431bp) protein (477aa)
DNA/RNA helicase, superfamily II n=1 Tax=Variovorax sp. CF313 RepID=J3CWI5_9BURK rbh
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:EJL79676.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax s
dead/deah box helicase domain-containing protein
SCNpilot_cont_300_bf_scaffold_455_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7177..8631)
DNA (1455bp) protein (485aa)
multidrug transporter n=1 Tax=Variovorax paradoxus RepID=UPI000361E0AD rbh
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35772.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
multi antimicrobial extrusion protein mate
SCNpilot_cont_300_bf_scaffold_455_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8691..8861
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CW33_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79674.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
SCNpilot_cont_300_bf_scaffold_455_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8955..9275
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XK12_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU52475.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
SCNpilot_cont_300_bf_scaffold_455_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9295..10182)
DNA (888bp) protein (296aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2TM64_9BURK rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL79672.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_455_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10274..11242
DNA (969bp) protein (323aa)
Putative permease, DMT superfamily n=1 Tax=Variovorax sp. CF313 RepID=J3CWI2_9BURK rbh
Putative permease, DMT superfamily {ECO:0000313|EMBL:EJL79671.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
hypothetical protein
SCNpilot_cont_300_bf_scaffold_455_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11411..12109)
DNA (699bp) protein (233aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CW30_9BURK rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL79669.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_455_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12106..13410)
DNA (1305bp) protein (435aa)
NAD(FAD)-dependent dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J2L373_9BURK rbh
NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:EJL79668.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" s
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
SCNpilot_cont_300_bf_scaffold_455_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13407..13661)
DNA (255bp) protein (85aa)
Ferredoxin n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZZ0_VARPE
ferredoxin
Ferredoxin {ECO:0000313|EMBL:ADU40099.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;
SCNpilot_cont_300_bf_scaffold_455_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13658..14761)
DNA (1104bp) protein (368aa)
FAD dependent oxidoreductase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZZ1_VARPE rbh
fad dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADU40100.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax parado
SCNpilot_cont_300_bf_scaffold_455_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14773..15708)
DNA (936bp) protein (312aa)
4-hydroxyproline epimerase (EC:5.1.1.8)
Proline racemase n=1 Tax=Variovorax sp. CF313 RepID=J2KHJ7_9BURK rbh
Proline racemase {ECO:0000313|EMBL:EJL79665.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_455_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15723..16865)
DNA (1143bp) protein (381aa)
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036342A3 rbh
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL79664.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
extracellular ligand-binding receptor
SCNpilot_cont_300_bf_scaffold_455_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16917..17831)
DNA (915bp) protein (305aa)
dihydrodipicolinate synthase n=1 Tax=Variovorax paradoxus RepID=UPI00036B72E0 rbh
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:EJL79663.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;
dihydrodipicolinate synthetase
SCNpilot_cont_300_bf_scaffold_455_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17978..18715)
DNA (738bp) protein (246aa)
Surface antigen family protein n=1 Tax=Variovorax sp. CF313 RepID=J2TM55_9BURK rbh
Surface antigen family protein {ECO:0000313|EMBL:EJL79662.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp.
17 kDa surface antigen
SCNpilot_cont_300_bf_scaffold_455_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18804..20129)
DNA (1326bp) protein (442aa)
HipA domain-containing protein n=1 Tax=Variovorax sp. CF313 RepID=J3CWH7_9BURK rbh
HipA domain-containing protein {ECO:0000313|EMBL:EJL79661.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp.
hipa n-terminal domain-containing protein
SCNpilot_cont_300_bf_scaffold_455_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20126..20587)
DNA (462bp) protein (154aa)
Putative transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2KHJ4_9BURK
Putative transcriptional regulator {ECO:0000313|EMBL:EJL79660.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
XRE family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_455_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20711..21709)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CW24_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL79659.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
putative Bug-like extracytoplasmic solute binding receptor, TTT family
SCNpilot_cont_300_bf_scaffold_455_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21732..22934)
DNA (1203bp) protein (401aa)
amidohydrolase (EC:3.5.1.32)
Amidohydrolase {ECO:0000313|EMBL:ADU40107.1}; EC=3.5.1.32 {ECO:0000313|EMBL:ADU40107.1};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovora
Amidohydrolase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZZ8_VARPE rbh
SCNpilot_cont_300_bf_scaffold_455_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23015..23869)
DNA (855bp) protein (285aa)
Pirin-related protein n=1 Tax=Variovorax sp. CF313 RepID=J2KHI1_9BURK rbh
Pirin-related protein {ECO:0000313|EMBL:EJL79645.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
pirin domain-containing protein
SCNpilot_cont_300_bf_scaffold_455_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23866..24453)
DNA (588bp) protein (196aa)
NADPH-dependent FMN reductase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V000_VARPE rbh
nadph-dependent fmn reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ADU40109.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax parad
SCNpilot_cont_300_bf_scaffold_455_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24501..24881)
DNA (381bp) protein (127aa)
DoxX family protein n=1 Tax=Variovorax paradoxus RepID=UPI0003614291
DoxX protein {ECO:0000313|EMBL:EJL79644.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp
DoxX family protein
SCNpilot_cont_300_bf_scaffold_455_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24958..25902
DNA (945bp) protein (315aa)
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000371B567 rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL79643.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
transcriptional regulator, LysR family
SCNpilot_cont_300_bf_scaffold_455_29
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26077..27840
DNA (1764bp) protein (588aa)
Nerd domain protein id=1267953 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
SCNpilot_cont_300_bf_scaffold_455_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27926..28402
DNA (477bp) protein (159aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Variovorax sp. CF313 RepID=J2TM38_9BURK rbh
FKBP-type peptidylprolyl isomerase
Displaying items 1-30 of 47 in total

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